Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC026366.1-201ENST00000488803 879 ntBASIC17.51■□□□□ 0.39
TRAF3IP2O43734 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP2O43734 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRAF3IP2O43734 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRAF3IP2O43734 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.51■□□□□ 0.39
TRAF3IP2O43734 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAF3IP2O43734 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF3IP2O43734 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF3IP2O43734 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAF3IP2O43734 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 CD99P1-205ENST00000527459 561 ntBASIC17.48■□□□□ 0.39
TRAF3IP2O43734 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAF3IP2O43734 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 ESRRAP1-201ENST00000400596 1257 ntBASIC17.47■□□□□ 0.39
TRAF3IP2O43734 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAF3IP2O43734 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms