Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RRP8O43159 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RRP8O43159 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.48■□□□□ 0.55
RRP8O43159 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RRP8O43159 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RRP8O43159 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RRP8O43159 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.48■□□□□ 0.55
RRP8O43159 MFAP1P1-201ENST00000442257 1255 ntBASIC18.48■□□□□ 0.55
RRP8O43159 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.48■□□□□ 0.55
RRP8O43159 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.48■□□□□ 0.55
RRP8O43159 AC011298.2-201ENST00000617989 482 ntBASIC18.48■□□□□ 0.55
RRP8O43159 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.48■□□□□ 0.55
RRP8O43159 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RRP8O43159 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RRP8O43159 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RRP8O43159 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RRP8O43159 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RRP8O43159 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RRP8O43159 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RRP8O43159 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RRP8O43159 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RRP8O43159 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RRP8O43159 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RRP8O43159 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RRP8O43159 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.47■□□□□ 0.55
RRP8O43159 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RRP8O43159 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.47■□□□□ 0.55
RRP8O43159 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RRP8O43159 TUBB8P6-201ENST00000436895 1288 ntBASIC18.47■□□□□ 0.55
RRP8O43159 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RRP8O43159 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.47■□□□□ 0.55
RRP8O43159 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.47■□□□□ 0.55
RRP8O43159 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
RRP8O43159 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RRP8O43159 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RRP8O43159 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RRP8O43159 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RRP8O43159 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RRP8O43159 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.47■□□□□ 0.55
RRP8O43159 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RRP8O43159 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RRP8O43159 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RRP8O43159 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.46■□□□□ 0.55
RRP8O43159 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RRP8O43159 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RRP8O43159 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RRP8O43159 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RRP8O43159 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.46■□□□□ 0.55
RRP8O43159 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
RRP8O43159 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RRP8O43159 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.46■□□□□ 0.55
RRP8O43159 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.46■□□□□ 0.55
RRP8O43159 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.46■□□□□ 0.55
RRP8O43159 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RRP8O43159 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RRP8O43159 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RRP8O43159 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RRP8O43159 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RRP8O43159 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
RRP8O43159 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RRP8O43159 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.45■□□□□ 0.54
RRP8O43159 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RRP8O43159 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.45■□□□□ 0.54
RRP8O43159 AC004951.3-201ENST00000418645 1148 ntBASIC18.45■□□□□ 0.54
RRP8O43159 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 AC007663.1-201ENST00000438948 1240 ntBASIC18.45■□□□□ 0.54
RRP8O43159 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RRP8O43159 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.45■□□□□ 0.54
RRP8O43159 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.45■□□□□ 0.54
RRP8O43159 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.45■□□□□ 0.54
RRP8O43159 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.45■□□□□ 0.54
RRP8O43159 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.45■□□□□ 0.54
RRP8O43159 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 AC005332.1-201ENST00000577698 1310 ntBASIC18.45■□□□□ 0.54
RRP8O43159 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
RRP8O43159 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.45■□□□□ 0.54
RRP8O43159 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.45■□□□□ 0.54
RRP8O43159 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RRP8O43159 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
RRP8O43159 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RRP8O43159 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.44■□□□□ 0.54
RRP8O43159 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RRP8O43159 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RRP8O43159 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RRP8O43159 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms