Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH17O14917 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.74■□□□□ 0.59
PCDH17O14917 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH17O14917 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDH17O14917 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDH17O14917 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDH17O14917 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDH17O14917 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDH17O14917 AL121906.2-201ENST00000621597 723 ntBASIC18.74■□□□□ 0.59
PCDH17O14917 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH17O14917 AC087289.5-201ENST00000586076 3175 ntBASIC18.74■□□□□ 0.59
PCDH17O14917 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDH17O14917 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH17O14917 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH17O14917 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDH17O14917 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH17O14917 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDH17O14917 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDH17O14917 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDH17O14917 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDH17O14917 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH17O14917 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH17O14917 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH17O14917 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH17O14917 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH17O14917 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH17O14917 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH17O14917 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH17O14917 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH17O14917 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDH17O14917 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDH17O14917 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCDH17O14917 AC239809.2-201ENST00000415381 517 ntBASIC18.73■□□□□ 0.59
PCDH17O14917 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH17O14917 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDH17O14917 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDH17O14917 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.73■□□□□ 0.59
PCDH17O14917 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDH17O14917 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH17O14917 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH17O14917 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDH17O14917 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PCDH17O14917 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH17O14917 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH17O14917 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PCDH17O14917 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDH17O14917 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH17O14917 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH17O14917 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDH17O14917 AC125437.2-201ENST00000625180 2167 ntBASIC18.72■□□□□ 0.59
PCDH17O14917 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH17O14917 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH17O14917 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PCDH17O14917 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDH17O14917 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH17O14917 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH17O14917 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDH17O14917 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH17O14917 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDH17O14917 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDH17O14917 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDH17O14917 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDH17O14917 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDH17O14917 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDH17O14917 AL135905.2-201ENST00000584934 1404 ntBASIC18.72■□□□□ 0.59
PCDH17O14917 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDH17O14917 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PCDH17O14917 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH17O14917 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH17O14917 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH17O14917 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDH17O14917 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PCDH17O14917 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH17O14917 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDH17O14917 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH17O14917 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH17O14917 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDH17O14917 AC008550.1-201ENST00000511500 884 ntBASIC18.71■□□□□ 0.59
PCDH17O14917 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH17O14917 AC233263.1-201ENST00000578059 224 ntBASIC18.71■□□□□ 0.59
PCDH17O14917 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.71■□□□□ 0.59
PCDH17O14917 AC110285.5-201ENST00000611501 352 ntBASIC18.71■□□□□ 0.59
PCDH17O14917 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDH17O14917 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDH17O14917 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PCDH17O14917 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms