Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SBNO1A3KN83 AL671277.2-201ENST00000458060 996 ntBASIC26.74■■□□□ 1.87
SBNO1A3KN83 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC26.74■■□□□ 1.87
SBNO1A3KN83 AL353719.1-201ENST00000566847 864 ntBASIC26.74■■□□□ 1.87
SBNO1A3KN83 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC26.74■■□□□ 1.87
SBNO1A3KN83 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC26.74■■□□□ 1.87
SBNO1A3KN83 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC26.74■■□□□ 1.87
SBNO1A3KN83 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
SBNO1A3KN83 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC26.74■■□□□ 1.87
SBNO1A3KN83 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SBNO1A3KN83 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SBNO1A3KN83 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
SBNO1A3KN83 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SBNO1A3KN83 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC26.73■■□□□ 1.87
SBNO1A3KN83 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SBNO1A3KN83 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC26.73■■□□□ 1.87
SBNO1A3KN83 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC26.73■■□□□ 1.87
SBNO1A3KN83 AL031432.5-201ENST00000641059 760 ntBASIC26.73■■□□□ 1.87
SBNO1A3KN83 AC005332.1-201ENST00000577698 1310 ntBASIC26.73■■□□□ 1.87
SBNO1A3KN83 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SBNO1A3KN83 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SBNO1A3KN83 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SBNO1A3KN83 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC26.73■■□□□ 1.87
SBNO1A3KN83 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC26.73■■□□□ 1.87
SBNO1A3KN83 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC26.73■■□□□ 1.87
SBNO1A3KN83 AC026310.3-201ENST00000625186 2373 ntBASIC26.73■■□□□ 1.87
SBNO1A3KN83 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SBNO1A3KN83 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SBNO1A3KN83 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC26.72■■□□□ 1.87
SBNO1A3KN83 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC26.72■■□□□ 1.87
SBNO1A3KN83 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC26.72■■□□□ 1.87
SBNO1A3KN83 AL441883.1-201ENST00000566170 1045 ntBASIC26.72■■□□□ 1.87
SBNO1A3KN83 AL512604.3-201ENST00000569583 964 ntBASIC26.72■■□□□ 1.87
SBNO1A3KN83 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC26.72■■□□□ 1.87
SBNO1A3KN83 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SBNO1A3KN83 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SBNO1A3KN83 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SBNO1A3KN83 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC26.72■■□□□ 1.87
SBNO1A3KN83 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SBNO1A3KN83 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SBNO1A3KN83 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC26.72■■□□□ 1.87
SBNO1A3KN83 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
SBNO1A3KN83 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SBNO1A3KN83 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC26.72■■□□□ 1.87
SBNO1A3KN83 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC26.72■■□□□ 1.87
SBNO1A3KN83 DPP3P2-201ENST00000416030 1696 ntBASIC26.72■■□□□ 1.87
SBNO1A3KN83 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SBNO1A3KN83 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SBNO1A3KN83 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
SBNO1A3KN83 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
SBNO1A3KN83 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC26.71■■□□□ 1.87
SBNO1A3KN83 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC26.71■■□□□ 1.87
SBNO1A3KN83 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC26.71■■□□□ 1.87
SBNO1A3KN83 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SBNO1A3KN83 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC26.71■■□□□ 1.87
SBNO1A3KN83 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
SBNO1A3KN83 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SBNO1A3KN83 BID-203ENST00000399765 1879 ntTSL 2 BASIC26.71■■□□□ 1.87
SBNO1A3KN83 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
SBNO1A3KN83 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
SBNO1A3KN83 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC26.71■■□□□ 1.87
SBNO1A3KN83 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC26.71■■□□□ 1.87
SBNO1A3KN83 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SBNO1A3KN83 AC026396.1-201ENST00000419388 421 ntBASIC26.71■■□□□ 1.87
SBNO1A3KN83 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC26.71■■□□□ 1.87
SBNO1A3KN83 AL359075.1-203ENST00000462729 1002 ntBASIC26.71■■□□□ 1.87
SBNO1A3KN83 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC26.71■■□□□ 1.87
SBNO1A3KN83 AC093458.2-201ENST00000623150 629 ntBASIC26.71■■□□□ 1.87
SBNO1A3KN83 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
SBNO1A3KN83 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
SBNO1A3KN83 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC26.7■■□□□ 1.86
SBNO1A3KN83 PHGDH-210ENST00000641115 1638 ntBASIC26.7■■□□□ 1.86
SBNO1A3KN83 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
SBNO1A3KN83 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SBNO1A3KN83 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
SBNO1A3KN83 AC007225.1-201ENST00000566331 1836 ntBASIC26.7■■□□□ 1.86
SBNO1A3KN83 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SBNO1A3KN83 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SBNO1A3KN83 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC26.7■■□□□ 1.86
SBNO1A3KN83 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC26.7■■□□□ 1.86
SBNO1A3KN83 GLRB-205ENST00000512619 728 ntTSL 3 BASIC26.7■■□□□ 1.86
SBNO1A3KN83 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC26.7■■□□□ 1.86
SBNO1A3KN83 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC26.7■■□□□ 1.86
SBNO1A3KN83 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SBNO1A3KN83 LINC00565-201ENST00000562710 2331 ntBASIC26.69■■□□□ 1.86
SBNO1A3KN83 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC26.69■■□□□ 1.86
SBNO1A3KN83 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC26.69■■□□□ 1.86
SBNO1A3KN83 WWC2-AS2-201ENST00000578387 2183 ntBASIC26.69■■□□□ 1.86
SBNO1A3KN83 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SBNO1A3KN83 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC26.69■■□□□ 1.86
SBNO1A3KN83 DAP-202ENST00000432074 1048 ntTSL 2 BASIC26.69■■□□□ 1.86
SBNO1A3KN83 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC26.69■■□□□ 1.86
SBNO1A3KN83 CA15P1-201ENST00000481698 905 ntBASIC26.69■■□□□ 1.86
SBNO1A3KN83 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC26.69■■□□□ 1.86
SBNO1A3KN83 CLEC4GP1-201ENST00000596555 870 ntBASIC26.69■■□□□ 1.86
SBNO1A3KN83 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
SBNO1A3KN83 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
SBNO1A3KN83 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SBNO1A3KN83 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.68■■□□□ 1.86
SBNO1A3KN83 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms