Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 UBE2DNL-204ENST00000602536 740 ntBASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 KRT16P6-202ENST00000425692 1426 ntBASIC14.91□□□□□ -0.02
TRAV8-1A0A0A6YYK1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 AC026471.1-201ENST00000564629 3026 ntBASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV8-1A0A0A6YYK1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 HCG11-201ENST00000411553 5696 ntBASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AC123595.1-201ENST00000440769 1046 ntBASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 KRT18P14-201ENST00000534205 1250 ntBASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 AP001271.2-201ENST00000624018 1556 ntBASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV8-1A0A0A6YYK1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms