Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC187A0A096LP49 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 AC006128.1-201ENST00000624704 1661 ntBASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 AC091076.1-201ENST00000610741 619 ntBASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 AC096733.2-201ENST00000609937 1394 ntBASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC187A0A096LP49 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 AC092720.2-201ENST00000602388 1665 ntBASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 AC117947.1-201ENST00000427448 529 ntBASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 SLC25A1P2-201ENST00000430693 912 ntBASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC187A0A096LP49 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC187A0A096LP49 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC187A0A096LP49 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC187A0A096LP49 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC187A0A096LP49 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC187A0A096LP49 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC187A0A096LP49 RNF152P1-201ENST00000397754 604 ntBASIC18.62■□□□□ 0.57
CCDC187A0A096LP49 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC187A0A096LP49 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC187A0A096LP49 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC187A0A096LP49 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
CCDC187A0A096LP49 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC187A0A096LP49 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC187A0A096LP49 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC187A0A096LP49 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC187A0A096LP49 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC187A0A096LP49 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC187A0A096LP49 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC187A0A096LP49 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC187A0A096LP49 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC187A0A096LP49 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC187A0A096LP49 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC187A0A096LP49 FAM8A6P-201ENST00000407496 1135 ntBASIC18.61■□□□□ 0.57
CCDC187A0A096LP49 UPK3BP1-201ENST00000428678 509 ntBASIC18.61■□□□□ 0.57
CCDC187A0A096LP49 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC187A0A096LP49 AC008040.2-201ENST00000461049 708 ntBASIC18.61■□□□□ 0.57
CCDC187A0A096LP49 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC187A0A096LP49 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.61■□□□□ 0.57
CCDC187A0A096LP49 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC187A0A096LP49 AC010653.2-201ENST00000623505 997 ntBASIC18.61■□□□□ 0.57
CCDC187A0A096LP49 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC187A0A096LP49 AC007225.1-201ENST00000566331 1836 ntBASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 AC139887.4-201ENST00000607877 719 ntBASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 AL138966.2-201ENST00000621997 464 ntBASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 AL358472.4-201ENST00000633140 710 ntBASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms