Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC021678.1-201ENST00000505195 936 ntBASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 NMNAT1P4-201ENST00000505598 840 ntBASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 HMGB1P29-201ENST00000505659 499 ntBASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 RNU6-1261P-201ENST00000517194 104 ntBASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 SLC2A13P1-201ENST00000531560 322 ntBASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC008083.2-201ENST00000546707 476 ntBASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC090971.3-201ENST00000557871 1041 ntBASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC090312.2-201ENST00000582687 378 ntBASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC090699.1-201ENST00000586264 321 ntBASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC005518.2-201ENST00000603254 282 ntBASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AL451085.1-201ENST00000604546 690 ntBASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC239600.2-201ENST00000619615 1165 ntBASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC099667.1-201ENST00000624222 469 ntBASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 AC090132.1-201ENST00000524071 1480 ntBASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PCDHGA11Q9Y5H2 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC095038.1-201ENST00000429248 1591 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 RNU6-1090P-201ENST00000364065 94 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 RPL31P1-201ENST00000398116 372 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC133644.1-201ENST00000398171 937 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 IGLC6-201ENST00000410078 317 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 RNU4-55P-201ENST00000410731 137 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AL157884.1-201ENST00000424561 454 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC005033.1-201ENST00000428904 813 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 RPL7P56-201ENST00000429441 717 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AL451074.3-201ENST00000437709 472 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AL512605.1-202ENST00000441919 381 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 RN7SL36P-201ENST00000469345 276 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 RBM43P1-201ENST00000476891 1081 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 RPL34P29-201ENST00000491411 325 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AL445187.1-201ENST00000502685 260 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC098799.3-201ENST00000506095 438 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 SSX8-201ENST00000506270 579 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC010493.1-201ENST00000513479 292 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AP003499.1-201ENST00000527217 574 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC022878.1-201ENST00000530684 149 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC091488.1-201ENST00000604239 660 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC115286.1-201ENST00000604298 434 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AP004247.3-201ENST00000608682 624 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 IGKV1OR1-1-201ENST00000613775 347 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC023509.5-201ENST00000617434 807 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AL451054.1-201ENST00000621770 772 ntBASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC7.35□□□□□ -1.23
PCDHGA11Q9Y5H2 AC073488.2-201ENST00000631903 751 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms