Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC125336.1-201ENST00000508893 2827 ntBASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 AC027279.1-201ENST00000568885 4284 ntBASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 AP000473.2-201ENST00000602659 1537 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 Z83820.1-201ENST00000456978 1499 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 AC005261.6-201ENST00000623072 1387 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 RN7SKP28-201ENST00000364770 305 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 PEX12P1-201ENST00000400284 1048 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 RN7SKP59-201ENST00000410520 314 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 VN1R21P-201ENST00000426703 765 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 RPS27AP6-201ENST00000427962 448 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 CFL1P1-202ENST00000432948 411 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 MED28P3-201ENST00000444288 531 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 AC110749.1-201ENST00000462007 357 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 AL133445.1-201ENST00000467051 452 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 RN7SL547P-201ENST00000490793 290 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 ASNSP4-201ENST00000511103 447 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 AC015712.7-201ENST00000615211 635 ntBASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.6□□□□□ -1.35
CLIP2Q9UDT6 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 AC018809.2-201ENST00000602436 3823 ntBASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 SPRYD7P1-201ENST00000443861 570 ntBASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 NPM1P19-201ENST00000450070 712 ntBASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 VDAC2P4-201ENST00000452925 711 ntBASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 AC007386.1-201ENST00000455212 582 ntBASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 RPS7P6-201ENST00000485777 579 ntBASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 GLUD1P3-202ENST00000508551 200 ntBASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 SNORA70.11-201ENST00000515987 138 ntBASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 SNORA70.13-201ENST00000516116 138 ntBASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 AL163952.1-202ENST00000569625 600 ntBASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 CR788268.1-201ENST00000603931 1809 ntBASIC6.59□□□□□ -1.35
CLIP2Q9UDT6 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CLIP2Q9UDT6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CLIP2Q9UDT6 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CLIP2Q9UDT6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 RNA5SP319-201ENST00000362768 119 ntBASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 RN7SKP185-201ENST00000362813 326 ntBASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 RNU4-2-201ENST00000365668 141 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms