Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 RNU1-65P-201ENST00000363919 148 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 RNU4-40P-201ENST00000364351 143 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 RNU6-532P-201ENST00000384318 107 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 LRRC37BP1-201ENST00000398851 714 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 MTCO1P56-201ENST00000401674 224 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AL034374.1-201ENST00000406329 351 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 RNA5SP155-201ENST00000411154 129 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 BTF3P8-201ENST00000414577 526 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 OR6K4P-201ENST00000423179 955 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 EMC3-AS1-205ENST00000438698 534 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AL353093.1-201ENST00000441292 436 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AC245291.3-201ENST00000443400 292 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AC103563.5-201ENST00000455643 364 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 RBMY2HP-201ENST00000457961 720 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AC122718.2-201ENST00000505325 591 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AC004223.2-201ENST00000590309 544 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AL499605.1-201ENST00000604628 403 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AL135786.2-201ENST00000608422 615 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AC015660.5-201ENST00000623238 564 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AL683826.1-201ENST00000624104 627 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AP002967.1-201ENST00000624203 539 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AC004777.1-201ENST00000624317 287 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 OR1S1-201ENST00000624470 978 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AL132640.3-201ENST00000630473 177 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AC011455.2-201ENST00000599320 3336 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 AC092724.1-201ENST00000624623 3397 ntBASIC6.14□□□□□ -1.43
CCM2LQ9NUG4 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 AC005725.1-201ENST00000577346 2607 ntBASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 SEC63P2-201ENST00000503863 1939 ntBASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 GNG5P2-201ENST00000372054 207 ntBASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 RNU6-185P-201ENST00000384421 107 ntBASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 RNA5SP176-201ENST00000390956 110 ntBASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 AL035419.1-201ENST00000397037 564 ntBASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 AL133260.1-201ENST00000405720 405 ntBASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 HMGB3P18-201ENST00000406327 590 ntBASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 CYP4F30P-202ENST00000420048 405 ntBASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 GTF2IP2-201ENST00000424290 697 ntBASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 DPY19L1P2-201ENST00000426647 915 ntBASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 MTCO1P52-201ENST00000433928 531 ntBASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 RPSAP40-201ENST00000442343 891 ntBASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 RPS10P18-201ENST00000442662 495 ntBASIC6.13□□□□□ -1.43
CCM2LQ9NUG4 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms