Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SUMO2P3-201ENST00000438311 288 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 HMGB1P26-201ENST00000452520 628 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 RPS27AP3-201ENST00000453803 454 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 RN7SL423P-201ENST00000486202 304 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 FTH1P8-201ENST00000498161 514 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC008427.1-201ENST00000503102 655 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC021146.7-201ENST00000509604 775 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 CYCSP22-201ENST00000517555 339 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC073581.1-201ENST00000519036 575 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC090022.1-201ENST00000546569 311 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC139697.1-201ENST00000548429 745 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC010547.6-201ENST00000571789 193 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 SNORD95-201ENST00000579879 68 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 CBX3P2-202ENST00000583365 535 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC020916.2-201ENST00000591242 360 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AL121652.1-201ENST00000608851 448 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC022467.1-201ENST00000614738 749 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VTA1Q9NP79 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 AC096921.2-201ENST00000561507 1916 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 PDZK1P1-202ENST00000425209 1350 ntBASIC6.79□□□□□ -1.32
VTA1Q9NP79 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VTA1Q9NP79 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VTA1Q9NP79 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.79□□□□□ -1.32
VTA1Q9NP79 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
VTA1Q9NP79 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 MTND5P11-201ENST00000511037 1812 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VTA1Q9NP79 AC092111.2-201ENST00000611627 1414 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 AC011815.2-201ENST00000618230 2021 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 RNU5E-10P-201ENST00000363506 118 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 RNA5SP500-201ENST00000364486 119 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 RN7SKP28-201ENST00000364770 305 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 SNORA11B-201ENST00000408175 129 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 RPL34P3-201ENST00000421454 338 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 NMD3P2-201ENST00000421815 761 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 USP12PY-201ENST00000427677 1064 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 BX119904.1-201ENST00000432026 348 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 MTCYBP15-201ENST00000433123 1127 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 AC092447.2-201ENST00000435487 669 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 AL022237.1-201ENST00000446663 358 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 AC074386.1-201ENST00000476560 767 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 RN7SL177P-201ENST00000476596 299 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 RN7SL57P-201ENST00000493687 290 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VTA1Q9NP79 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 AC119403.2-201ENST00000590960 598 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 MTCO2P22-201ENST00000603246 681 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 FAM27E4-201ENST00000605259 342 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 AC112220.2-201ENST00000605513 533 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 AL021368.3-201ENST00000607119 578 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 TCL6_3.1-201ENST00000619064 137 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 MIR193BHG-214ENST00000641765 509 ntBASIC6.78□□□□□ -1.32
VTA1Q9NP79 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VTA1Q9NP79 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
VTA1Q9NP79 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VTA1Q9NP79 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VTA1Q9NP79 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VTA1Q9NP79 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VTA1Q9NP79 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.78□□□□□ -1.32
VTA1Q9NP79 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms