Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 RPS26P13-201ENST00000419030 330 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 OR5AW1P-201ENST00000426334 1006 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 MED14P1-201ENST00000430517 648 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 MYO5BP3-201ENST00000431872 1279 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 MTND1P30-201ENST00000441241 901 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 SNRPEP8-201ENST00000442866 260 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AL157827.1-201ENST00000447622 132 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC010878.1-201ENST00000456500 1047 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 WBP1LP1-201ENST00000460451 896 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 WBP1LP4-201ENST00000505043 344 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC073358.1-201ENST00000505671 684 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 CHCHD2P7-201ENST00000508008 452 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC010587.2-201ENST00000511727 448 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC025881.1-201ENST00000518851 512 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AP006587.2-201ENST00000530696 493 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 RN7SL786P-201ENST00000579130 298 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AP002884.5-201ENST00000595053 1132 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AP001330.5-201ENST00000607176 411 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 AL159169.2-201ENST00000610061 1269 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC005840.5-201ENST00000619166 599 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC012629.3-201ENST00000623397 328 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC005332.9-201ENST00000620266 2921 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SSU72Q9NP77 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SSU72Q9NP77 OR2AH1P-202ENST00000641232 2744 ntBASIC6.78□□□□□ -1.32
SSU72Q9NP77 MARK2P4-201ENST00000503381 2380 ntBASIC6.77□□□□□ -1.32
SSU72Q9NP77 MRRFP1-201ENST00000435941 1675 ntBASIC6.77□□□□□ -1.32
SSU72Q9NP77 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
SSU72Q9NP77 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.33
SSU72Q9NP77 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SSU72Q9NP77 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SSU72Q9NP77 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
SSU72Q9NP77 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.77□□□□□ -1.33
SSU72Q9NP77 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.77□□□□□ -1.33
SSU72Q9NP77 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.77□□□□□ -1.33
SSU72Q9NP77 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SSU72Q9NP77 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.77□□□□□ -1.33
SSU72Q9NP77 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
SSU72Q9NP77 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SSU72Q9NP77 RNU6-707P-201ENST00000364647 95 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SSU72Q9NP77 ATP5HP3-201ENST00000396994 486 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 HNRNPCP2-201ENST00000399515 881 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.77□□□□□ -1.33
SSU72Q9NP77 MTCO1P17-201ENST00000411522 491 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 VDAC1P10-201ENST00000416715 891 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 LINC01347-201ENST00000417964 355 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 AC004448.2-201ENST00000422360 586 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.77□□□□□ -1.33
SSU72Q9NP77 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC6.77□□□□□ -1.33
SSU72Q9NP77 MTND3P23-201ENST00000431980 347 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 HBBP1-201ENST00000433329 439 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 BSNDP4-201ENST00000436076 388 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 AC108039.2-201ENST00000440214 359 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 TCEA1P3-201ENST00000443005 880 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 WASF1P1-201ENST00000447560 1131 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC6.77□□□□□ -1.33
SSU72Q9NP77 ATP5G1P6-201ENST00000451206 412 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 SNRPGP9-201ENST00000456025 225 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 RPL5P13-201ENST00000462840 709 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 AC091982.1-202ENST00000473923 343 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 RN7SL379P-201ENST00000479912 293 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 RN7SL338P-201ENST00000481467 293 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
SSU72Q9NP77 HMGB1P36-201ENST00000487709 576 ntBASIC6.77□□□□□ -1.33
SSU72Q9NP77 RN7SL239P-201ENST00000490061 300 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms