Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC009729.1-201ENST00000548873 1133 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC040904.1-201ENST00000590850 223 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC073387.2-201ENST00000604797 784 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC004890.3-201ENST00000605566 1095 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC021755.4-201ENST00000616620 456 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 MIR6823-201ENST00000622118 61 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC112694.2-201ENST00000623697 768 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC026422.1-201ENST00000623961 452 ntBASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
AMBRA1Q9C0C7 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AL137058.3-201ENST00000624531 3099 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AL355578.1-201ENST00000607405 1328 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC010132.2-201ENST00000295493 1043 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AL049545.1-201ENST00000401856 572 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 RN7SKP86-201ENST00000410454 332 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC008173.1-201ENST00000418901 264 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 OSTCP5-201ENST00000425293 453 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC093422.3-201ENST00000428506 305 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 OR6R1P-201ENST00000431838 940 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 RPSAP32-201ENST00000432681 526 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 OR10R1P-201ENST00000441524 1141 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC234771.2-201ENST00000445718 597 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC018645.1-201ENST00000505003 109 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 GAPDHP71-201ENST00000511530 1003 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 CYP4F27P-201ENST00000514557 494 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 RPA2P3-201ENST00000533268 770 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC023968.1-201ENST00000560719 475 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC009097.3-201ENST00000563557 1018 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC025283.1-201ENST00000572039 734 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 CBX3P2-202ENST00000583365 535 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC005332.4-201ENST00000592752 579 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC092954.1-201ENST00000609121 445 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC245100.7-201ENST00000609678 442 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 VN1R9P-201ENST00000614184 867 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AL035461.2-201ENST00000619201 524 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 MIR7159-201ENST00000620587 66 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 AP003485.2-201ENST00000623636 610 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 MIR1910-201ENST00000636955 80 ntBASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
AMBRA1Q9C0C7 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms