Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 NDUFS5P5-201ENST00000437256 321 ntBASIC5.75□□□□□ -1.49
TRIM4Q9C037 RPL21P133-201ENST00000443666 476 ntBASIC5.75□□□□□ -1.49
TRIM4Q9C037 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM4Q9C037 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 snoU109.5-201ENST00000516231 132 ntBASIC5.75□□□□□ -1.49
TRIM4Q9C037 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 NATP-201ENST00000523491 878 ntBASIC5.75□□□□□ -1.49
TRIM4Q9C037 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 MIR1269B-201ENST00000580405 75 ntBASIC5.75□□□□□ -1.49
TRIM4Q9C037 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM4Q9C037 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM4Q9C037 NEPNP-201ENST00000404786 1371 ntBASIC5.75□□□□□ -1.49
TRIM4Q9C037 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM4Q9C037 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
TRIM4Q9C037 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM4Q9C037 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
TRIM4Q9C037 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 AC106872.5-201ENST00000508856 1416 ntBASIC5.74□□□□□ -1.49
TRIM4Q9C037 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM4Q9C037 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM4Q9C037 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM4Q9C037 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM4Q9C037 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM4Q9C037 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM4Q9C037 RNU1-134P-201ENST00000362935 165 ntBASIC5.74□□□□□ -1.49
TRIM4Q9C037 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 SUMO2P3-201ENST00000438311 288 ntBASIC5.74□□□□□ -1.49
TRIM4Q9C037 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 OTX2P1-201ENST00000450956 354 ntBASIC5.74□□□□□ -1.49
TRIM4Q9C037 AL445665.1-202ENST00000452436 324 ntBASIC5.74□□□□□ -1.49
TRIM4Q9C037 AC091685.2-201ENST00000454924 864 ntBASIC5.74□□□□□ -1.49
TRIM4Q9C037 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 RPS26P24-201ENST00000497656 331 ntBASIC5.74□□□□□ -1.49
TRIM4Q9C037 TPM3P3-201ENST00000521343 354 ntBASIC5.74□□□□□ -1.49
TRIM4Q9C037 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 AL049779.3-201ENST00000557141 606 ntBASIC5.74□□□□□ -1.49
TRIM4Q9C037 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 AC012557.1-201ENST00000607115 611 ntBASIC5.74□□□□□ -1.49
TRIM4Q9C037 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 SMG1P4-204ENST00000523028 4131 ntBASIC5.74□□□□□ -1.49
TRIM4Q9C037 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM4Q9C037 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM4Q9C037 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM4Q9C037 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM4Q9C037 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM4Q9C037 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM4Q9C037 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM4Q9C037 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM4Q9C037 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM4Q9C037 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM4Q9C037 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM4Q9C037 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM4Q9C037 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM4Q9C037 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM4Q9C037 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 RN7SKP185-201ENST00000362813 326 ntBASIC5.73□□□□□ -1.49
TRIM4Q9C037 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 RNU6-171P-201ENST00000384354 107 ntBASIC5.73□□□□□ -1.49
TRIM4Q9C037 RN7SKP279-201ENST00000411383 298 ntBASIC5.73□□□□□ -1.49
TRIM4Q9C037 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 SDHDP6-201ENST00000414693 480 ntBASIC5.73□□□□□ -1.49
TRIM4Q9C037 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 AC130360.1-201ENST00000425489 1117 ntBASIC5.73□□□□□ -1.49
TRIM4Q9C037 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 TCEA1P3-201ENST00000443005 880 ntBASIC5.73□□□□□ -1.49
TRIM4Q9C037 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 RPL23AP60-201ENST00000450011 454 ntBASIC5.73□□□□□ -1.49
TRIM4Q9C037 RPS27AP2-201ENST00000457576 465 ntBASIC5.73□□□□□ -1.49
TRIM4Q9C037 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM4Q9C037 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms