Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC026348.1-201ENST00000462549 1053 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 UOX-201ENST00000471089 899 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC109486.1-201ENST00000486833 374 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AL591122.1-201ENST00000487348 492 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 SSX8-201ENST00000506270 579 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC024451.1-201ENST00000508013 779 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC114786.4-201ENST00000508771 728 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 LRRC34P2-201ENST00000514850 553 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 RNU6-358P-201ENST00000516564 75 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 RN7SKP233-201ENST00000517005 110 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 GLYATL1P4-201ENST00000529326 906 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC121758.1-202ENST00000556917 658 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC019193.2-201ENST00000610012 634 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AL139418.1-201ENST00000613613 177 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AL353726.1-201ENST00000614041 1000 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AL160413.1-201ENST00000622780 310 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC022743.1-201ENST00000624990 664 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AL355974.1-201ENST00000618896 1708 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 RN7SKP23-201ENST00000625159 4301 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 Z93929.1-201ENST00000418200 1475 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AP002001.2-201ENST00000529025 1469 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 AC104581.5-201ENST00000624171 7141 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
TRIM47Q96LD4 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.31□□□□□ -1.08
TRIM47Q96LD4 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AL079343.1-201ENST00000572358 1771 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 BX284613.1-201ENST00000452221 1641 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 Y_RNA.160-201ENST00000363677 92 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 RN7SKP191-201ENST00000364713 306 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 RNU6-1318P-201ENST00000365389 103 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 MIR606-201ENST00000384851 96 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AC092642.1-201ENST00000392417 425 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 RPL12P9-201ENST00000412942 488 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AC007390.1-201ENST00000415722 356 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 SPATA20P1-201ENST00000423089 438 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 MTCO2P12-201ENST00000427426 682 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 PTGES3P1-201ENST00000439531 483 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 TIMM8BP2-201ENST00000445940 251 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AL390728.3-201ENST00000452704 270 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 RPL21P47-201ENST00000483696 477 ntBASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC8.3□□□□□ -1.08
TRIM47Q96LD4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms