Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC109464.1-201ENST00000511091 819 ntBASIC7.19□□□□□ -1.26
DDX11Q96FC9 RN7SKP5-201ENST00000517045 272 ntBASIC7.19□□□□□ -1.26
DDX11Q96FC9 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.19□□□□□ -1.26
DDX11Q96FC9 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.19□□□□□ -1.26
DDX11Q96FC9 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.19□□□□□ -1.26
DDX11Q96FC9 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.19□□□□□ -1.26
DDX11Q96FC9 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC7.19□□□□□ -1.26
DDX11Q96FC9 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC7.19□□□□□ -1.26
DDX11Q96FC9 LINC00556-201ENST00000569603 412 ntBASIC7.19□□□□□ -1.26
DDX11Q96FC9 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.19□□□□□ -1.26
DDX11Q96FC9 AC090666.1-201ENST00000578241 445 ntBASIC7.19□□□□□ -1.26
DDX11Q96FC9 MIR4509-3-201ENST00000578671 94 ntBASIC7.19□□□□□ -1.26
DDX11Q96FC9 MIR4509-2-201ENST00000583920 94 ntBASIC7.19□□□□□ -1.26
DDX11Q96FC9 RPP40P2-201ENST00000603596 712 ntBASIC7.19□□□□□ -1.26
DDX11Q96FC9 Z94722.1-201ENST00000604328 474 ntBASIC7.19□□□□□ -1.26
DDX11Q96FC9 AC009237.12-201ENST00000604755 742 ntBASIC7.19□□□□□ -1.26
DDX11Q96FC9 AC245008.1-201ENST00000608123 476 ntBASIC7.19□□□□□ -1.26
DDX11Q96FC9 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
DDX11Q96FC9 MIR4509-1-201ENST00000618224 94 ntBASIC7.19□□□□□ -1.26
DDX11Q96FC9 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.19□□□□□ -1.26
DDX11Q96FC9 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.19□□□□□ -1.26
DDX11Q96FC9 CASC19-238ENST00000641523 1558 ntBASIC7.19□□□□□ -1.26
DDX11Q96FC9 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.19□□□□□ -1.26
DDX11Q96FC9 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC7.19□□□□□ -1.26
DDX11Q96FC9 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DDX11Q96FC9 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
DDX11Q96FC9 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DDX11Q96FC9 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DDX11Q96FC9 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
DDX11Q96FC9 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DDX11Q96FC9 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.19□□□□□ -1.26
DDX11Q96FC9 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
DDX11Q96FC9 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
DDX11Q96FC9 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.19□□□□□ -1.26
DDX11Q96FC9 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
DDX11Q96FC9 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DDX11Q96FC9 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
DDX11Q96FC9 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
DDX11Q96FC9 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DDX11Q96FC9 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
DDX11Q96FC9 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 RNU1-134P-201ENST00000362935 165 ntBASIC7.18□□□□□ -1.26
DDX11Q96FC9 RNU6-618P-201ENST00000363518 112 ntBASIC7.18□□□□□ -1.26
DDX11Q96FC9 SUGT1P2-201ENST00000379452 992 ntBASIC7.18□□□□□ -1.26
DDX11Q96FC9 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DDX11Q96FC9 BX119904.4-201ENST00000424402 301 ntBASIC7.18□□□□□ -1.26
DDX11Q96FC9 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 AC073143.1-201ENST00000436316 395 ntBASIC7.18□□□□□ -1.26
DDX11Q96FC9 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DDX11Q96FC9 HLA-DPA3-207ENST00000454398 229 ntBASIC7.18□□□□□ -1.26
DDX11Q96FC9 C1DP3-201ENST00000455013 423 ntBASIC7.18□□□□□ -1.26
DDX11Q96FC9 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 RNA5SP340-201ENST00000517132 107 ntBASIC7.18□□□□□ -1.26
DDX11Q96FC9 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 AP003033.1-201ENST00000527244 415 ntBASIC7.18□□□□□ -1.26
DDX11Q96FC9 AP003396.4-201ENST00000527574 265 ntBASIC7.18□□□□□ -1.26
DDX11Q96FC9 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DDX11Q96FC9 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 MIR3614-201ENST00000581261 86 ntBASIC7.18□□□□□ -1.26
DDX11Q96FC9 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.18□□□□□ -1.26
DDX11Q96FC9 AC079416.3-201ENST00000624479 549 ntBASIC7.18□□□□□ -1.26
DDX11Q96FC9 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
DDX11Q96FC9 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DDX11Q96FC9 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
DDX11Q96FC9 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
DDX11Q96FC9 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.17□□□□□ -1.26
DDX11Q96FC9 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.17□□□□□ -1.26
DDX11Q96FC9 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.17□□□□□ -1.26
DDX11Q96FC9 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.17□□□□□ -1.26
DDX11Q96FC9 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
DDX11Q96FC9 RNF19BPY-201ENST00000458209 1550 ntBASIC7.17□□□□□ -1.26
DDX11Q96FC9 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
DDX11Q96FC9 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.17□□□□□ -1.26
DDX11Q96FC9 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
DDX11Q96FC9 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
DDX11Q96FC9 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
DDX11Q96FC9 RNU6-792P-201ENST00000363490 107 ntBASIC7.17□□□□□ -1.26
DDX11Q96FC9 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
DDX11Q96FC9 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
DDX11Q96FC9 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.17□□□□□ -1.26
DDX11Q96FC9 AC015977.1-201ENST00000418887 292 ntBASIC7.17□□□□□ -1.26
DDX11Q96FC9 AJ239321.1-201ENST00000424255 564 ntBASIC7.17□□□□□ -1.26
DDX11Q96FC9 MTCO1P51-201ENST00000427672 1060 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms