Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 OR9K1P-202ENST00000641111 3217 ntBASIC5.46□□□□□ -1.54
NUP54Q7Z3B4 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC005224.3-201ENST00000584683 2140 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC005332.5-201ENST00000591222 2919 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC023490.2-201ENST00000359859 470 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 RNA5SP273-201ENST00000362484 113 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 RNA5SP477-201ENST00000362639 119 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 RNU1-74P-201ENST00000384108 171 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 RPS4XP5-201ENST00000419038 768 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC066692.1-201ENST00000421721 457 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AL035660.1-201ENST00000422041 222 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 OR6K4P-201ENST00000423179 955 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 NPM1P26-201ENST00000426339 738 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AP000936.3-201ENST00000438127 255 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 ARL5AP3-201ENST00000439327 386 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 DNAJA1P5-201ENST00000440278 943 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 EIF5AP4-201ENST00000441206 465 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 DNAJC19P5-201ENST00000443295 316 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AL513343.1-201ENST00000451818 792 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 TPRKBP1-201ENST00000456243 481 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 LDHBP2-201ENST00000456969 1005 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 RN7SL72P-201ENST00000460697 269 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 NDUFA5P5-201ENST00000468361 342 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC104629.2-201ENST00000468627 598 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 LARP7P4-201ENST00000481075 878 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 GAPDHP71-201ENST00000511530 1003 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 MTND2P31-201ENST00000512602 616 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 Y_RNA.667-201ENST00000516212 107 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 RN7SKP288-201ENST00000516227 268 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 RNA5SP438-201ENST00000516561 112 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC060775.1-201ENST00000518241 520 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC087272.1-201ENST00000523624 533 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AP000648.1-201ENST00000529682 397 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC007346.2-201ENST00000564816 892 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC005726.4-201ENST00000582858 458 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 MIR4420-201ENST00000583944 77 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AL031601.1-201ENST00000605702 394 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC021106.3-201ENST00000623925 531 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AP002967.1-201ENST00000624203 539 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 BCORP1-203ENST00000513194 5093 ntBASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.45□□□□□ -1.54
NUP54Q7Z3B4 AC107027.3-201ENST00000565095 3473 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 SPATA2P1-201ENST00000431223 2055 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms