Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 MIR1271-201ENST00000408537 86 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 RNA5SP231-201ENST00000410496 138 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AC245028.2-201ENST00000458673 253 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AC004890.1-201ENST00000461005 181 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AL122020.1-201ENST00000472287 459 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 BTG4P1-201ENST00000510421 183 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 SCARNA18.1-201ENST00000516330 83 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 WBP1LP3-201ENST00000523033 208 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AC084759.1-201ENST00000561168 290 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AC004232.2-201ENST00000574245 821 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AC005332.5-201ENST00000591222 2919 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 MAPK10-286ENST00000641208 8747 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 AL672167.1-204ENST00000641875 3017 ntBASIC4.94□□□□□ -1.62
CCDC58Q4VC31 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC58Q4VC31 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AC114947.2-201ENST00000565748 2125 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 RN7SKP146-201ENST00000410242 334 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 RN7SKP38-201ENST00000410782 309 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 NANOGP4-201ENST00000427230 913 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 HSPD1P12-201ENST00000429127 1069 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 RPL7AP49-201ENST00000429522 581 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AL591438.1-201ENST00000433508 581 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 LINC00328-2P-201ENST00000436585 219 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 RPL6P30-201ENST00000443382 862 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AC093166.4-201ENST00000457867 318 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 RPS17P15-201ENST00000475609 349 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 RPL7AP10-201ENST00000481016 791 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 NIP7P2-201ENST00000485801 544 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 RN7SL57P-201ENST00000493687 290 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AC113367.2-201ENST00000505749 160 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AP003396.4-201ENST00000527574 265 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AC068870.1-201ENST00000563737 2455 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AC124856.1-201ENST00000600819 896 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AC006840.1-201ENST00000623069 542 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AC126323.6-202ENST00000568092 3511 ntBASIC4.93□□□□□ -1.62
CCDC58Q4VC31 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CCDC58Q4VC31 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC58Q4VC31 SNORD56.6-201ENST00000384569 71 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms