Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM71Q2Q1W2 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
TRIM71Q2Q1W2 DNM1P47-203ENST00000571780 12667 ntBASIC6.4□□□□□ -1.38
TRIM71Q2Q1W2 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM71Q2Q1W2 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM71Q2Q1W2 AL512283.1-201ENST00000606756 1384 ntBASIC6.4□□□□□ -1.39
TRIM71Q2Q1W2 AL137058.3-201ENST00000624531 3099 ntBASIC6.4□□□□□ -1.39
TRIM71Q2Q1W2 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
TRIM71Q2Q1W2 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
TRIM71Q2Q1W2 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
TRIM71Q2Q1W2 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.4□□□□□ -1.39
TRIM71Q2Q1W2 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.4□□□□□ -1.39
TRIM71Q2Q1W2 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.4□□□□□ -1.39
TRIM71Q2Q1W2 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM71Q2Q1W2 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM71Q2Q1W2 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 U3.7-201ENST00000363668 216 ntBASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 MIR421-201ENST00000365696 85 ntBASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 AL356057.1-202ENST00000402263 756 ntBASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 AC113412.1-201ENST00000425840 504 ntBASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 EIF2S2P5-201ENST00000457635 968 ntBASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 ACA64.4-201ENST00000459070 127 ntBASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 PFN1P6-201ENST00000476786 399 ntBASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 RPL32P33-201ENST00000487023 394 ntBASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 AC090543.1-201ENST00000492168 485 ntBASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 AC126365.2-201ENST00000580630 379 ntBASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 MIR4260-201ENST00000583107 67 ntBASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 FKBP1AP1-201ENST00000594588 318 ntBASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 OR51C1P-201ENST00000608504 942 ntBASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 AC084824.5-201ENST00000612009 413 ntBASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 AC114786.1-201ENST00000512892 1415 ntBASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 AL590763.1-201ENST00000398297 1545 ntBASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.39□□□□□ -1.39
TRIM71Q2Q1W2 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 RNA5SP131-201ENST00000365452 119 ntBASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 U3.23-201ENST00000391132 200 ntBASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 RN7SKP151-201ENST00000410230 316 ntBASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 MTCO1P45-201ENST00000431457 267 ntBASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 RANP1-206ENST00000455094 651 ntBASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 AP002345.1-201ENST00000456493 928 ntBASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 AC104629.2-201ENST00000468627 598 ntBASIC6.38□□□□□ -1.39
TRIM71Q2Q1W2 AC022336.1-201ENST00000475510 337 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms