Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC133794.1-201ENST00000602731 914 ntBASIC5.4□□□□□ -1.54
LTBQ06643 AL158050.2-201ENST00000605336 568 ntBASIC5.4□□□□□ -1.54
LTBQ06643 MIR6748-201ENST00000610433 71 ntBASIC5.4□□□□□ -1.54
LTBQ06643 AC097478.2-201ENST00000610572 514 ntBASIC5.4□□□□□ -1.54
LTBQ06643 AL031658.2-201ENST00000616850 651 ntBASIC5.4□□□□□ -1.54
LTBQ06643 AL355974.3-201ENST00000617383 467 ntBASIC5.4□□□□□ -1.54
LTBQ06643 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.4□□□□□ -1.54
LTBQ06643 AL356118.1-201ENST00000635272 1078 ntBASIC5.4□□□□□ -1.54
LTBQ06643 AC000095.2-202ENST00000637415 154 ntBASIC5.4□□□□□ -1.54
LTBQ06643 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
LTBQ06643 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.4□□□□□ -1.55
LTBQ06643 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
LTBQ06643 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LTBQ06643 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
LTBQ06643 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.4□□□□□ -1.55
LTBQ06643 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.4□□□□□ -1.55
LTBQ06643 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
LTBQ06643 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
LTBQ06643 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LTBQ06643 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.4□□□□□ -1.55
LTBQ06643 THAP12P9-201ENST00000503971 2360 ntBASIC5.4□□□□□ -1.55
LTBQ06643 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.4□□□□□ -1.55
LTBQ06643 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LTBQ06643 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LTBQ06643 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LTBQ06643 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LTBQ06643 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LTBQ06643 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LTBQ06643 OR9K1P-201ENST00000326513 941 ntBASIC5.39□□□□□ -1.55
LTBQ06643 SNORA63.3-201ENST00000362682 132 ntBASIC5.39□□□□□ -1.55
LTBQ06643 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.39□□□□□ -1.55
LTBQ06643 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.39□□□□□ -1.55
LTBQ06643 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LTBQ06643 RN7SKP17-201ENST00000411242 351 ntBASIC5.39□□□□□ -1.55
LTBQ06643 RPL35AP3-201ENST00000414680 288 ntBASIC5.39□□□□□ -1.55
LTBQ06643 RPS7P8-201ENST00000418311 581 ntBASIC5.39□□□□□ -1.55
LTBQ06643 NMD3P2-201ENST00000421815 761 ntBASIC5.39□□□□□ -1.55
LTBQ06643 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.39□□□□□ -1.55
LTBQ06643 NANOGP4-201ENST00000427230 913 ntBASIC5.39□□□□□ -1.55
LTBQ06643 NPM1P22-201ENST00000427761 952 ntBASIC5.39□□□□□ -1.55
LTBQ06643 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LTBQ06643 RPS27P18-201ENST00000431701 247 ntBASIC5.39□□□□□ -1.55
LTBQ06643 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.39□□□□□ -1.55
LTBQ06643 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.39□□□□□ -1.55
LTBQ06643 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LTBQ06643 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.39□□□□□ -1.55
LTBQ06643 AC108751.3-201ENST00000461814 1020 ntBASIC5.39□□□□□ -1.55
LTBQ06643 AC068587.2-201ENST00000478386 781 ntBASIC5.39□□□□□ -1.55
LTBQ06643 ATG10-AS1-201ENST00000504846 648 ntBASIC5.39□□□□□ -1.55
LTBQ06643 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.39□□□□□ -1.55
LTBQ06643 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.39□□□□□ -1.55
LTBQ06643 AC130364.2-201ENST00000528639 604 ntBASIC5.39□□□□□ -1.55
LTBQ06643 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LTBQ06643 MTND1P24-201ENST00000552175 861 ntBASIC5.39□□□□□ -1.55
LTBQ06643 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.39□□□□□ -1.55
LTBQ06643 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LTBQ06643 NPM1P42-201ENST00000560329 862 ntBASIC5.39□□□□□ -1.55
LTBQ06643 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.39□□□□□ -1.55
LTBQ06643 AC027216.1-201ENST00000577726 685 ntBASIC5.39□□□□□ -1.55
LTBQ06643 AC015911.5-201ENST00000587076 451 ntBASIC5.39□□□□□ -1.55
LTBQ06643 AC013244.3-201ENST00000605614 388 ntBASIC5.39□□□□□ -1.55
LTBQ06643 CR589904.2-201ENST00000612533 440 ntBASIC5.39□□□□□ -1.55
LTBQ06643 AC004801.6-201ENST00000616571 978 ntBASIC5.39□□□□□ -1.55
LTBQ06643 AP000484.1-201ENST00000620067 1252 ntBASIC5.39□□□□□ -1.55
LTBQ06643 AL138955.1-201ENST00000622881 1040 ntBASIC5.39□□□□□ -1.55
LTBQ06643 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.39□□□□□ -1.55
LTBQ06643 AC063952.1-203ENST00000634410 658 ntBASIC5.39□□□□□ -1.55
LTBQ06643 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.39□□□□□ -1.55
LTBQ06643 AL445984.1-201ENST00000637834 659 ntBASIC5.39□□□□□ -1.55
LTBQ06643 AC132825.8-201ENST00000640783 297 ntBASIC5.39□□□□□ -1.55
LTBQ06643 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.39□□□□□ -1.55
LTBQ06643 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
LTBQ06643 AL513548.1-201ENST00000562904 1724 ntBASIC5.39□□□□□ -1.55
LTBQ06643 AL354854.1-201ENST00000455940 1363 ntBASIC5.39□□□□□ -1.55
LTBQ06643 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LTBQ06643 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
LTBQ06643 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LTBQ06643 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LTBQ06643 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LTBQ06643 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.38□□□□□ -1.55
LTBQ06643 AC025470.1-201ENST00000510053 2032 ntBASIC5.38□□□□□ -1.55
LTBQ06643 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LTBQ06643 CASC19-238ENST00000641523 1558 ntBASIC5.38□□□□□ -1.55
LTBQ06643 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
LTBQ06643 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LTBQ06643 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
LTBQ06643 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LTBQ06643 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
LTBQ06643 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LTBQ06643 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.38□□□□□ -1.55
LTBQ06643 MIR143-201ENST00000385300 106 ntBASIC5.38□□□□□ -1.55
LTBQ06643 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
LTBQ06643 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.38□□□□□ -1.55
LTBQ06643 AL358178.1-201ENST00000407698 397 ntBASIC5.38□□□□□ -1.55
LTBQ06643 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.38□□□□□ -1.55
LTBQ06643 AC073464.3-201ENST00000422564 712 ntBASIC5.38□□□□□ -1.55
LTBQ06643 AC073508.1-201ENST00000428866 656 ntBASIC5.38□□□□□ -1.55
LTBQ06643 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.38□□□□□ -1.55
LTBQ06643 RPS12P17-201ENST00000438591 377 ntBASIC5.38□□□□□ -1.55
LTBQ06643 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms