Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 HMGN1P20-201ENST00000411849 300 ntBASIC5.45□□□□□ -1.54
CDKL1Q00532 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.45□□□□□ -1.54
CDKL1Q00532 AC007161.1-204ENST00000423039 460 ntBASIC5.45□□□□□ -1.54
CDKL1Q00532 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.45□□□□□ -1.54
CDKL1Q00532 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.45□□□□□ -1.54
CDKL1Q00532 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.45□□□□□ -1.54
CDKL1Q00532 AL359265.1-201ENST00000440296 795 ntBASIC5.45□□□□□ -1.54
CDKL1Q00532 IGBP1P3-201ENST00000447449 1000 ntBASIC5.45□□□□□ -1.54
CDKL1Q00532 LRRC37A14P-201ENST00000452297 462 ntBASIC5.45□□□□□ -1.54
CDKL1Q00532 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.45□□□□□ -1.54
CDKL1Q00532 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.45□□□□□ -1.54
CDKL1Q00532 TRBV8-1-201ENST00000481590 279 ntBASIC5.45□□□□□ -1.54
CDKL1Q00532 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.45□□□□□ -1.54
CDKL1Q00532 EIF3LP3-201ENST00000495197 822 ntBASIC5.45□□□□□ -1.54
CDKL1Q00532 AP000926.3-201ENST00000497201 299 ntBASIC5.45□□□□□ -1.54
CDKL1Q00532 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.45□□□□□ -1.54
CDKL1Q00532 AC026782.2-201ENST00000510845 636 ntBASIC5.45□□□□□ -1.54
CDKL1Q00532 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.45□□□□□ -1.54
CDKL1Q00532 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.45□□□□□ -1.54
CDKL1Q00532 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.45□□□□□ -1.54
CDKL1Q00532 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.45□□□□□ -1.54
CDKL1Q00532 AC005363.1-201ENST00000530779 351 ntBASIC5.45□□□□□ -1.54
CDKL1Q00532 TRAV11-201ENST00000539512 339 ntBASIC5.45□□□□□ -1.54
CDKL1Q00532 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.45□□□□□ -1.54
CDKL1Q00532 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.45□□□□□ -1.54
CDKL1Q00532 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.45□□□□□ -1.54
CDKL1Q00532 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.45□□□□□ -1.54
CDKL1Q00532 SNORA35B-201ENST00000607417 129 ntBASIC5.45□□□□□ -1.54
CDKL1Q00532 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.45□□□□□ -1.54
CDKL1Q00532 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CDKL1Q00532 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDKL1Q00532 MT-RNR2-201ENST00000387347 1559 ntBASIC5.45□□□□□ -1.54
CDKL1Q00532 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.45□□□□□ -1.54
CDKL1Q00532 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDKL1Q00532 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDKL1Q00532 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDKL1Q00532 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.45□□□□□ -1.54
CDKL1Q00532 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL1Q00532 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.44□□□□□ -1.54
CDKL1Q00532 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.44□□□□□ -1.54
CDKL1Q00532 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL1Q00532 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL1Q00532 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL1Q00532 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDKL1Q00532 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL1Q00532 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL1Q00532 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL1Q00532 HMGB1P20-201ENST00000402555 677 ntBASIC5.44□□□□□ -1.54
CDKL1Q00532 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.44□□□□□ -1.54
CDKL1Q00532 GAPDHP42-201ENST00000406848 981 ntBASIC5.44□□□□□ -1.54
CDKL1Q00532 SLC20A1P1-201ENST00000413906 956 ntBASIC5.44□□□□□ -1.54
CDKL1Q00532 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.44□□□□□ -1.54
CDKL1Q00532 AC117434.1-201ENST00000419971 836 ntBASIC5.44□□□□□ -1.54
CDKL1Q00532 AC093155.2-201ENST00000420734 937 ntBASIC5.44□□□□□ -1.54
CDKL1Q00532 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.44□□□□□ -1.54
CDKL1Q00532 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL1Q00532 AC005297.1-201ENST00000444765 862 ntBASIC5.44□□□□□ -1.54
CDKL1Q00532 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.44□□□□□ -1.54
CDKL1Q00532 AL358876.1-201ENST00000453364 1075 ntBASIC5.44□□□□□ -1.54
CDKL1Q00532 AC021106.1-201ENST00000509020 1058 ntBASIC5.44□□□□□ -1.54
CDKL1Q00532 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.44□□□□□ -1.54
CDKL1Q00532 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.44□□□□□ -1.54
CDKL1Q00532 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
CDKL1Q00532 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.44□□□□□ -1.54
CDKL1Q00532 AC060766.1-201ENST00000590824 627 ntBASIC5.44□□□□□ -1.54
CDKL1Q00532 AC009237.13-201ENST00000603193 276 ntBASIC5.44□□□□□ -1.54
CDKL1Q00532 AC025574.2-201ENST00000615621 514 ntBASIC5.44□□□□□ -1.54
CDKL1Q00532 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL1Q00532 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.44□□□□□ -1.54
CDKL1Q00532 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.44□□□□□ -1.54
CDKL1Q00532 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.44□□□□□ -1.54
CDKL1Q00532 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDKL1Q00532 AL022311.1-201ENST00000623726 19416 ntBASIC5.44□□□□□ -1.54
CDKL1Q00532 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.44□□□□□ -1.54
CDKL1Q00532 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDKL1Q00532 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL1Q00532 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CDKL1Q00532 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL1Q00532 AC079097.1-201ENST00000512187 1399 ntBASIC5.43□□□□□ -1.54
CDKL1Q00532 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL1Q00532 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.43□□□□□ -1.54
CDKL1Q00532 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL1Q00532 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CDKL1Q00532 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.43□□□□□ -1.54
CDKL1Q00532 LINC02019-201ENST00000608605 2060 ntBASIC5.43□□□□□ -1.54
CDKL1Q00532 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL1Q00532 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDKL1Q00532 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL1Q00532 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL1Q00532 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.43□□□□□ -1.54
CDKL1Q00532 U3.28-201ENST00000391249 210 ntBASIC5.43□□□□□ -1.54
CDKL1Q00532 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.43□□□□□ -1.54
CDKL1Q00532 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDKL1Q00532 AC115283.1-201ENST00000427353 400 ntBASIC5.43□□□□□ -1.54
CDKL1Q00532 RPL7P56-201ENST00000429441 717 ntBASIC5.43□□□□□ -1.54
CDKL1Q00532 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.43□□□□□ -1.54
CDKL1Q00532 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.43□□□□□ -1.54
CDKL1Q00532 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.43□□□□□ -1.54
CDKL1Q00532 AC073465.2-201ENST00000440938 498 ntBASIC5.43□□□□□ -1.54
CDKL1Q00532 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms