Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
HSPG2P98160 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HSPG2P98160 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 ATM-215ENST00000530958 5718 ntTSL 2 BASIC3.21□□□□□ -1.9
HSPG2P98160 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC3.21□□□□□ -1.9
HSPG2P98160 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 AC140479.2-201ENST00000421567 3130 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 AC017079.1-201ENST00000333650 415 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 Z95152.1-201ENST00000453556 656 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 AC058823.1-201ENST00000485315 474 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.21□□□□□ -1.9
HSPG2P98160 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.21□□□□□ -1.9
HSPG2P98160 AC021106.1-201ENST00000509020 1058 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 OR7E128P-201ENST00000532736 1024 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 AL121834.1-201ENST00000572284 509 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 AC013731.1-201ENST00000604340 883 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 AP001885.1-201ENST00000621658 558 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 TACC2-210ENST00000369005 9673 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 ZNF652P1-201ENST00000442420 1309 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 SPATA31C1-201ENST00000420021 3895 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HSPG2P98160 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC3.21□□□□□ -1.9
HSPG2P98160 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 HSPD1P7-201ENST00000447985 1686 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC3.21□□□□□ -1.9
HSPG2P98160 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC3.21□□□□□ -1.9
HSPG2P98160 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC3.21□□□□□ -1.9
HSPG2P98160 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HSPG2P98160 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
HSPG2P98160 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 ATP5F1P3-201ENST00000397213 657 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.21□□□□□ -1.9
HSPG2P98160 RN7SL423P-201ENST00000486202 304 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HSPG2P98160 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HSPG2P98160 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC3.21□□□□□ -1.9
HSPG2P98160 U3.30-201ENST00000391308 210 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.21□□□□□ -1.9
HSPG2P98160 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.21□□□□□ -1.9
HSPG2P98160 RCC2P2-201ENST00000422174 918 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 CBX1P1-201ENST00000440184 427 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 RPL7P19-201ENST00000469948 618 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC3.21□□□□□ -1.9
HSPG2P98160 AC012339.2-201ENST00000523996 453 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 AGGF1P7-201ENST00000562369 913 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.21□□□□□ -1.9
HSPG2P98160 MIR6075-201ENST00000620782 95 ntBASIC3.21□□□□□ -1.9
HSPG2P98160 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC3.21□□□□□ -1.9
HSPG2P98160 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC3.21□□□□□ -1.9
HSPG2P98160 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HSPG2P98160 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HSPG2P98160 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC3.2□□□□□ -1.9
HSPG2P98160 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC3.2□□□□□ -1.9
HSPG2P98160 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HSPG2P98160 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HSPG2P98160 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
HSPG2P98160 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HSPG2P98160 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HSPG2P98160 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.2□□□□□ -1.9
HSPG2P98160 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
HSPG2P98160 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC3.2□□□□□ -1.9
HSPG2P98160 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
HSPG2P98160 RNU6-761P-201ENST00000384148 107 ntBASIC3.2□□□□□ -1.9
HSPG2P98160 MIR600-201ENST00000385007 98 ntBASIC3.2□□□□□ -1.9
HSPG2P98160 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC3.2□□□□□ -1.9
HSPG2P98160 RPSAP51-201ENST00000497462 645 ntBASIC3.2□□□□□ -1.9
HSPG2P98160 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC3.2□□□□□ -1.9
HSPG2P98160 NDUFB4P12-201ENST00000513465 390 ntBASIC3.2□□□□□ -1.9
HSPG2P98160 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HSPG2P98160 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC3.2□□□□□ -1.9
HSPG2P98160 AC106785.1-201ENST00000565935 262 ntBASIC3.2□□□□□ -1.9
HSPG2P98160 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC3.2□□□□□ -1.9
HSPG2P98160 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC3.2□□□□□ -1.9
HSPG2P98160 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HSPG2P98160 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HSPG2P98160 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HSPG2P98160 AL031651.1-201ENST00000615357 1438 ntBASIC3.2□□□□□ -1.9
HSPG2P98160 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC3.2□□□□□ -1.9
HSPG2P98160 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HSPG2P98160 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC3.2□□□□□ -1.9
HSPG2P98160 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms