Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MIR6721-201ENST00000617181 87 ntBASIC6.09□□□□□ -1.43
TPM4P67936 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.09□□□□□ -1.43
TPM4P67936 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.09□□□□□ -1.43
TPM4P67936 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TPM4P67936 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TPM4P67936 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
TPM4P67936 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.09□□□□□ -1.43
TPM4P67936 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TPM4P67936 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TPM4P67936 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
TPM4P67936 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
TPM4P67936 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TPM4P67936 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TPM4P67936 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.08□□□□□ -1.44
TPM4P67936 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.08□□□□□ -1.44
TPM4P67936 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.08□□□□□ -1.44
TPM4P67936 AC025574.1-201ENST00000554784 1653 ntBASIC6.08□□□□□ -1.44
TPM4P67936 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TPM4P67936 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TPM4P67936 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TPM4P67936 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
TPM4P67936 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TPM4P67936 EI24P3-201ENST00000399046 1062 ntBASIC6.08□□□□□ -1.44
TPM4P67936 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.08□□□□□ -1.44
TPM4P67936 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.08□□□□□ -1.44
TPM4P67936 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.08□□□□□ -1.44
TPM4P67936 PPIAP27-201ENST00000453800 265 ntBASIC6.08□□□□□ -1.44
TPM4P67936 AC245028.2-201ENST00000458673 253 ntBASIC6.08□□□□□ -1.44
TPM4P67936 RPSAP37-201ENST00000470913 821 ntBASIC6.08□□□□□ -1.44
TPM4P67936 RPS3AP15-201ENST00000483874 781 ntBASIC6.08□□□□□ -1.44
TPM4P67936 IGKV3D-25-201ENST00000519599 235 ntBASIC6.08□□□□□ -1.44
TPM4P67936 AC022360.1-201ENST00000521058 340 ntBASIC6.08□□□□□ -1.44
TPM4P67936 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.08□□□□□ -1.44
TPM4P67936 AP001000.1-201ENST00000526843 742 ntBASIC6.08□□□□□ -1.44
TPM4P67936 AC084121.1-201ENST00000533882 835 ntBASIC6.08□□□□□ -1.44
TPM4P67936 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TPM4P67936 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.08□□□□□ -1.44
TPM4P67936 AC127381.1-201ENST00000555979 939 ntBASIC6.08□□□□□ -1.44
TPM4P67936 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.08□□□□□ -1.44
TPM4P67936 MIR4502-201ENST00000580432 81 ntBASIC6.08□□□□□ -1.44
TPM4P67936 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.08□□□□□ -1.44
TPM4P67936 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.08□□□□□ -1.44
TPM4P67936 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.08□□□□□ -1.44
TPM4P67936 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.08□□□□□ -1.44
TPM4P67936 AL365181.4-201ENST00000609800 547 ntBASIC6.08□□□□□ -1.44
TPM4P67936 uc_338.29-201ENST00000615099 168 ntBASIC6.08□□□□□ -1.44
TPM4P67936 AC007204.1-201ENST00000621794 555 ntBASIC6.08□□□□□ -1.44
TPM4P67936 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TPM4P67936 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TPM4P67936 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.08□□□□□ -1.44
TPM4P67936 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.08□□□□□ -1.44
TPM4P67936 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.08□□□□□ -1.44
TPM4P67936 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
TPM4P67936 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TPM4P67936 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.08□□□□□ -1.44
TPM4P67936 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TPM4P67936 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.07□□□□□ -1.44
TPM4P67936 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
TPM4P67936 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.07□□□□□ -1.44
TPM4P67936 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TPM4P67936 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.07□□□□□ -1.44
TPM4P67936 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
TPM4P67936 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.07□□□□□ -1.44
TPM4P67936 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TPM4P67936 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.07□□□□□ -1.44
TPM4P67936 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TPM4P67936 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TPM4P67936 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.07□□□□□ -1.44
TPM4P67936 MIR551A-201ENST00000385042 96 ntBASIC6.07□□□□□ -1.44
TPM4P67936 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.07□□□□□ -1.44
TPM4P67936 AC211486.3-201ENST00000412694 621 ntBASIC6.07□□□□□ -1.44
TPM4P67936 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.07□□□□□ -1.44
TPM4P67936 Z82198.3-201ENST00000421145 199 ntBASIC6.07□□□□□ -1.44
TPM4P67936 PNKDP1-201ENST00000435914 430 ntBASIC6.07□□□□□ -1.44
TPM4P67936 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.07□□□□□ -1.44
TPM4P67936 CYCSP24-201ENST00000445119 316 ntBASIC6.07□□□□□ -1.44
TPM4P67936 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.07□□□□□ -1.44
TPM4P67936 AL450023.1-201ENST00000450868 751 ntBASIC6.07□□□□□ -1.44
TPM4P67936 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.07□□□□□ -1.44
TPM4P67936 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.07□□□□□ -1.44
TPM4P67936 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.07□□□□□ -1.44
TPM4P67936 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.07□□□□□ -1.44
TPM4P67936 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.07□□□□□ -1.44
TPM4P67936 NACAP5-201ENST00000509863 636 ntBASIC6.07□□□□□ -1.44
TPM4P67936 OR4A41P-201ENST00000533053 928 ntBASIC6.07□□□□□ -1.44
TPM4P67936 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TPM4P67936 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
TPM4P67936 AC040958.1-201ENST00000561102 201 ntBASIC6.07□□□□□ -1.44
TPM4P67936 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.07□□□□□ -1.44
TPM4P67936 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.07□□□□□ -1.44
TPM4P67936 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.07□□□□□ -1.44
TPM4P67936 AC109583.2-201ENST00000617367 129 ntBASIC6.07□□□□□ -1.44
TPM4P67936 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.07□□□□□ -1.44
TPM4P67936 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
TPM4P67936 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
TPM4P67936 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.07□□□□□ -1.44
TPM4P67936 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TPM4P67936 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
TPM4P67936 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
TPM4P67936 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms