Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ASNSP4-201ENST00000511103 447 ntBASIC5.67□□□□□ -1.5
CDH4P55283 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH4P55283 ATP5LP3-201ENST00000514223 304 ntBASIC5.67□□□□□ -1.5
CDH4P55283 AC078878.1-201ENST00000539832 958 ntBASIC5.67□□□□□ -1.5
CDH4P55283 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.67□□□□□ -1.5
CDH4P55283 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH4P55283 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH4P55283 AP001357.1-201ENST00000586304 1053 ntBASIC5.67□□□□□ -1.5
CDH4P55283 AC079395.2-201ENST00000610982 737 ntBASIC5.67□□□□□ -1.5
CDH4P55283 AC007204.2-201ENST00000615022 616 ntBASIC5.67□□□□□ -1.5
CDH4P55283 AC015712.7-201ENST00000615211 635 ntBASIC5.67□□□□□ -1.5
CDH4P55283 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH4P55283 AC144833.1-201ENST00000567953 4089 ntBASIC5.67□□□□□ -1.5
CDH4P55283 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH4P55283 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.67□□□□□ -1.5
CDH4P55283 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH4P55283 TET1P1-201ENST00000426627 2301 ntBASIC5.66□□□□□ -1.5
CDH4P55283 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH4P55283 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH4P55283 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.66□□□□□ -1.5
CDH4P55283 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH4P55283 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH4P55283 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH4P55283 MTCO1P11-201ENST00000429111 1528 ntBASIC5.66□□□□□ -1.5
CDH4P55283 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CDH4P55283 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.66□□□□□ -1.5
CDH4P55283 RNU11-201ENST00000387069 134 ntBASIC5.66□□□□□ -1.5
CDH4P55283 GABARAPL3-201ENST00000412799 354 ntBASIC5.66□□□□□ -1.5
CDH4P55283 AC021876.1-201ENST00000425959 359 ntBASIC5.66□□□□□ -1.5
CDH4P55283 MGAT2P2-201ENST00000427194 797 ntBASIC5.66□□□□□ -1.5
CDH4P55283 RPL7P56-201ENST00000429441 717 ntBASIC5.66□□□□□ -1.5
CDH4P55283 SPRYD7P1-201ENST00000443861 570 ntBASIC5.66□□□□□ -1.5
CDH4P55283 LINC02210-201ENST00000444561 288 ntBASIC5.66□□□□□ -1.5
CDH4P55283 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH4P55283 AZGP1P2-201ENST00000454506 345 ntBASIC5.66□□□□□ -1.5
CDH4P55283 RNU7-157P-201ENST00000459600 66 ntBASIC5.66□□□□□ -1.5
CDH4P55283 RN7SL188P-201ENST00000469842 285 ntBASIC5.66□□□□□ -1.5
CDH4P55283 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH4P55283 RN7SL547P-201ENST00000490793 290 ntBASIC5.66□□□□□ -1.5
CDH4P55283 GLUD1P3-202ENST00000508551 200 ntBASIC5.66□□□□□ -1.5
CDH4P55283 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH4P55283 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH4P55283 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.66□□□□□ -1.5
CDH4P55283 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.66□□□□□ -1.5
CDH4P55283 MIR3176-201ENST00000582210 90 ntBASIC5.66□□□□□ -1.5
CDH4P55283 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH4P55283 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH4P55283 AC018809.2-201ENST00000602436 3823 ntBASIC5.66□□□□□ -1.5
CDH4P55283 AL360012.1-201ENST00000602813 131 ntBASIC5.66□□□□□ -1.5
CDH4P55283 SUGT1P3-202ENST00000604259 383 ntBASIC5.66□□□□□ -1.5
CDH4P55283 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH4P55283 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH4P55283 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH4P55283 AC079776.5-201ENST00000641920 211 ntBASIC5.66□□□□□ -1.5
CDH4P55283 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH4P55283 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH4P55283 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH4P55283 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CDH4P55283 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH4P55283 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH4P55283 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH4P55283 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH4P55283 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH4P55283 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH4P55283 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH4P55283 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH4P55283 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH4P55283 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH4P55283 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH4P55283 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.65□□□□□ -1.5
CDH4P55283 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CDH4P55283 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
CDH4P55283 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH4P55283 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
CDH4P55283 SNORA51.1-201ENST00000363243 140 ntBASIC5.65□□□□□ -1.5
CDH4P55283 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH4P55283 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH4P55283 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.65□□□□□ -1.5
CDH4P55283 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH4P55283 RPS23P9-201ENST00000448848 438 ntBASIC5.65□□□□□ -1.5
CDH4P55283 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH4P55283 AC007386.1-201ENST00000455212 582 ntBASIC5.65□□□□□ -1.5
CDH4P55283 SIAH1P1-201ENST00000479411 923 ntBASIC5.65□□□□□ -1.5
CDH4P55283 EIF3LP3-201ENST00000495197 822 ntBASIC5.65□□□□□ -1.5
CDH4P55283 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH4P55283 AC011411.1-201ENST00000509592 876 ntBASIC5.65□□□□□ -1.5
CDH4P55283 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH4P55283 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH4P55283 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CDH4P55283 BX510359.5-201ENST00000515651 304 ntBASIC5.65□□□□□ -1.5
CDH4P55283 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH4P55283 IGKV2-18-201ENST00000522607 343 ntBASIC5.65□□□□□ -1.5
CDH4P55283 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH4P55283 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH4P55283 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH4P55283 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH4P55283 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH4P55283 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH4P55283 AC007225.2-201ENST00000562529 256 ntBASIC5.65□□□□□ -1.5
CDH4P55283 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms