Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC009961.3-201ENST00000449832 765 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 VN1R32P-201ENST00000452234 905 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 AC068228.1-201ENST00000461723 211 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 RPS7P7-201ENST00000463499 571 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 SRRM1P2-201ENST00000464531 1192 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 AC104689.1-201ENST00000473356 768 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 STRADBP1-201ENST00000478954 1281 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.69□□□□□ -1.34
EPHB3P54753 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.69□□□□□ -1.34
EPHB3P54753 OR4D12P-201ENST00000509361 911 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.69□□□□□ -1.34
EPHB3P54753 AC106800.2-201ENST00000514009 1103 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.69□□□□□ -1.34
EPHB3P54753 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.69□□□□□ -1.34
EPHB3P54753 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.69□□□□□ -1.34
EPHB3P54753 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.69□□□□□ -1.34
EPHB3P54753 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC6.69□□□□□ -1.34
EPHB3P54753 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.69□□□□□ -1.34
EPHB3P54753 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC6.69□□□□□ -1.34
EPHB3P54753 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.69□□□□□ -1.34
EPHB3P54753 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.69□□□□□ -1.34
EPHB3P54753 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.69□□□□□ -1.34
EPHB3P54753 MRPS21P8-201ENST00000569196 235 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.69□□□□□ -1.34
EPHB3P54753 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.69□□□□□ -1.34
EPHB3P54753 AC091135.1-201ENST00000585943 307 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 AC005332.4-201ENST00000592752 579 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 AL590229.1-201ENST00000603497 542 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 AP000811.1-201ENST00000603803 651 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 AL035411.2-201ENST00000604022 421 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.69□□□□□ -1.34
EPHB3P54753 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC6.69□□□□□ -1.34
EPHB3P54753 AL096803.3-201ENST00000609032 532 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 VN1R7P-201ENST00000619242 903 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.69□□□□□ -1.34
EPHB3P54753 AL160394.1-201ENST00000624765 724 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC6.69□□□□□ -1.34
EPHB3P54753 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.69□□□□□ -1.34
EPHB3P54753 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.69□□□□□ -1.34
EPHB3P54753 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.69□□□□□ -1.34
EPHB3P54753 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 AC092111.1-201ENST00000618256 3358 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
EPHB3P54753 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.69□□□□□ -1.34
EPHB3P54753 AC110716.2-201ENST00000563865 3945 ntBASIC6.69□□□□□ -1.34
EPHB3P54753 YES1P1-201ENST00000418510 1628 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AC027514.1-201ENST00000588561 1603 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.68□□□□□ -1.34
EPHB3P54753 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
EPHB3P54753 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
EPHB3P54753 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
EPHB3P54753 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
EPHB3P54753 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
EPHB3P54753 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
EPHB3P54753 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.68□□□□□ -1.34
EPHB3P54753 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.68□□□□□ -1.34
EPHB3P54753 AC004386.1-201ENST00000393214 761 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AL451046.1-201ENST00000406097 534 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 FCF1P5-201ENST00000406490 482 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AL133264.1-201ENST00000407157 562 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 RN7SKP108-201ENST00000411367 328 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.68□□□□□ -1.34
EPHB3P54753 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.68□□□□□ -1.34
EPHB3P54753 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC6.68□□□□□ -1.34
EPHB3P54753 AL513175.2-201ENST00000422071 443 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC6.68□□□□□ -1.34
EPHB3P54753 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.68□□□□□ -1.34
EPHB3P54753 AC093422.3-201ENST00000428506 305 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6.68□□□□□ -1.34
EPHB3P54753 AC098826.1-201ENST00000433943 471 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 PNKDP1-201ENST00000435914 430 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AL512326.1-201ENST00000443050 721 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AL360221.1-201ENST00000445989 335 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.68□□□□□ -1.34
EPHB3P54753 AC016724.1-201ENST00000453215 421 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AL133351.3-201ENST00000454998 193 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AC094085.1-201ENST00000468914 584 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
EPHB3P54753 RN7SL326P-201ENST00000477493 296 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.68□□□□□ -1.34
EPHB3P54753 AC011037.1-201ENST00000483964 558 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 RPL7P41-201ENST00000485823 957 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
EPHB3P54753 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.68□□□□□ -1.34
EPHB3P54753 PCNAP1-201ENST00000505363 709 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AC010460.1-201ENST00000507087 466 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 LTV1P1-201ENST00000510683 1237 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AC093752.1-206ENST00000511823 336 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC6.68□□□□□ -1.34
EPHB3P54753 IGKV1D-22-201ENST00000518953 324 ntBASIC6.68□□□□□ -1.34
EPHB3P54753 RPL12P22-201ENST00000519073 490 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms