Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
MSH6P52701 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
MSH6P52701 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
MSH6P52701 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
MSH6P52701 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.63□□□□□ -1.19
MSH6P52701 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC7.63□□□□□ -1.19
MSH6P52701 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
MSH6P52701 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
MSH6P52701 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
MSH6P52701 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
MSH6P52701 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
MSH6P52701 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
MSH6P52701 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
MSH6P52701 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC7.62□□□□□ -1.19
MSH6P52701 AL078599.1-201ENST00000402075 293 ntBASIC7.62□□□□□ -1.19
MSH6P52701 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.62□□□□□ -1.19
MSH6P52701 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC7.62□□□□□ -1.19
MSH6P52701 AL672138.1-201ENST00000450604 1015 ntBASIC7.62□□□□□ -1.19
MSH6P52701 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.62□□□□□ -1.19
MSH6P52701 IGBP1P5-201ENST00000507524 1000 ntBASIC7.62□□□□□ -1.19
MSH6P52701 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC7.62□□□□□ -1.19
MSH6P52701 MIR4270-201ENST00000581799 70 ntBASIC7.62□□□□□ -1.19
MSH6P52701 PRELID3BP3-201ENST00000584963 545 ntBASIC7.62□□□□□ -1.19
MSH6P52701 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
MSH6P52701 AC011487.3-201ENST00000593607 453 ntBASIC7.62□□□□□ -1.19
MSH6P52701 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
MSH6P52701 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.62□□□□□ -1.19
MSH6P52701 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
MSH6P52701 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
MSH6P52701 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
MSH6P52701 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
MSH6P52701 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
MSH6P52701 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
MSH6P52701 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
MSH6P52701 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
MSH6P52701 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
MSH6P52701 AC005725.1-201ENST00000577346 2607 ntBASIC7.62□□□□□ -1.19
MSH6P52701 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
MSH6P52701 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
MSH6P52701 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.62□□□□□ -1.19
MSH6P52701 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
MSH6P52701 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
MSH6P52701 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.61□□□□□ -1.19
MSH6P52701 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
MSH6P52701 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
MSH6P52701 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.61□□□□□ -1.19
MSH6P52701 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
MSH6P52701 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC7.61□□□□□ -1.19
MSH6P52701 ZDHHC20P1-204ENST00000435787 423 ntBASIC7.61□□□□□ -1.19
MSH6P52701 AC007537.2-201ENST00000472093 511 ntBASIC7.61□□□□□ -1.19
MSH6P52701 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.61□□□□□ -1.19
MSH6P52701 IGHVII-44-2-201ENST00000517728 250 ntBASIC7.61□□□□□ -1.19
MSH6P52701 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7.61□□□□□ -1.19
MSH6P52701 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7.61□□□□□ -1.19
MSH6P52701 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.61□□□□□ -1.19
MSH6P52701 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.61□□□□□ -1.19
MSH6P52701 MIR6758-201ENST00000620653 63 ntBASIC7.61□□□□□ -1.19
MSH6P52701 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.61□□□□□ -1.19
MSH6P52701 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.61□□□□□ -1.19
MSH6P52701 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7.61□□□□□ -1.19
MSH6P52701 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
MSH6P52701 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
MSH6P52701 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
MSH6P52701 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.61□□□□□ -1.19
MSH6P52701 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
MSH6P52701 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
MSH6P52701 MFSD8-239ENST00000641590 2479 ntBASIC7.61□□□□□ -1.19
MSH6P52701 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
MSH6P52701 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
MSH6P52701 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.61□□□□□ -1.19
MSH6P52701 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC7.61□□□□□ -1.19
MSH6P52701 MIPEPP2-201ENST00000422560 1819 ntBASIC7.61□□□□□ -1.19
MSH6P52701 AC009779.8-201ENST00000641684 4384 ntBASIC7.6□□□□□ -1.19
MSH6P52701 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.6□□□□□ -1.19
MSH6P52701 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.6□□□□□ -1.19
MSH6P52701 AC092647.2-201ENST00000452998 253 ntBASIC7.6□□□□□ -1.19
MSH6P52701 Z92846.1-201ENST00000456203 268 ntBASIC7.6□□□□□ -1.19
MSH6P52701 RPS4XP20-201ENST00000505751 772 ntBASIC7.6□□□□□ -1.19
MSH6P52701 MTND6P2-201ENST00000512226 524 ntBASIC7.6□□□□□ -1.19
MSH6P52701 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC7.6□□□□□ -1.19
MSH6P52701 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC7.6□□□□□ -1.19
MSH6P52701 TOMM20P2-201ENST00000540082 421 ntBASIC7.6□□□□□ -1.19
MSH6P52701 AL049779.3-201ENST00000557141 606 ntBASIC7.6□□□□□ -1.19
MSH6P52701 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.6□□□□□ -1.19
MSH6P52701 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.6□□□□□ -1.19
MSH6P52701 AC245389.2-201ENST00000616023 576 ntBASIC7.6□□□□□ -1.19
MSH6P52701 AC242843.1-201ENST00000618702 573 ntBASIC7.6□□□□□ -1.19
MSH6P52701 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC7.6□□□□□ -1.19
MSH6P52701 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
MSH6P52701 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
MSH6P52701 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
MSH6P52701 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
MSH6P52701 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC7.6□□□□□ -1.19
MSH6P52701 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
MSH6P52701 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
MSH6P52701 AC114876.1-201ENST00000490962 1366 ntBASIC7.6□□□□□ -1.19
MSH6P52701 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
MSH6P52701 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
MSH6P52701 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
MSH6P52701 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms