Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.68□□□□□ -1.5
CLCNKAP51800 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.68□□□□□ -1.5
CLCNKAP51800 DPPA2P4-201ENST00000563717 878 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.68□□□□□ -1.5
CLCNKAP51800 VN1R81P-201ENST00000602085 372 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 QTRT1P1-201ENST00000604344 1078 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLCNKAP51800 WBP1LP8-201ENST00000617401 327 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.68□□□□□ -1.5
CLCNKAP51800 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.68□□□□□ -1.5
CLCNKAP51800 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CLCNKAP51800 AC008691.1-209ENST00000642094 814 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.68□□□□□ -1.5
CLCNKAP51800 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLCNKAP51800 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLCNKAP51800 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLCNKAP51800 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CLCNKAP51800 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLCNKAP51800 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLCNKAP51800 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLCNKAP51800 AC239868.2-201ENST00000564237 4527 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 FBXL21-201ENST00000297158 1305 ntBASIC5.68□□□□□ -1.5
CLCNKAP51800 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CLCNKAP51800 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.68□□□□□ -1.5
CLCNKAP51800 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLCNKAP51800 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLCNKAP51800 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CLCNKAP51800 AC024341.1-201ENST00000526444 1552 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCNKAP51800 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLCNKAP51800 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCNKAP51800 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
CLCNKAP51800 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCNKAP51800 AC068870.3-201ENST00000625077 2536 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLCNKAP51800 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCNKAP51800 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCNKAP51800 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLCNKAP51800 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLCNKAP51800 RNA5SP394-201ENST00000364216 119 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 RN7SKP78-201ENST00000364711 318 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 OR6K3-202ENST00000368146 996 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CLCNKAP51800 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.67□□□□□ -1.5
CLCNKAP51800 AL512422.1-201ENST00000407033 553 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 RN7SKP206-201ENST00000410823 293 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 AL356968.2-201ENST00000412769 1257 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 AL357752.1-201ENST00000412817 349 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.67□□□□□ -1.5
CLCNKAP51800 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.67□□□□□ -1.5
CLCNKAP51800 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.67□□□□□ -1.5
CLCNKAP51800 AL590762.3-201ENST00000436372 640 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 SUMO2P3-201ENST00000438311 288 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 RPL36AP39-201ENST00000445859 318 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLCNKAP51800 C1DP3-201ENST00000455013 423 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 MTND2P39-201ENST00000457230 764 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 AC108751.3-201ENST00000461814 1020 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 AC079080.1-201ENST00000479841 822 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 RPS3AP15-201ENST00000483874 781 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 AC104109.1-201ENST00000498563 436 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 AC090058.1-201ENST00000498788 435 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.67□□□□□ -1.5
CLCNKAP51800 SCARNA6.1-201ENST00000516989 238 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 AC021678.3-201ENST00000517893 476 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.67□□□□□ -1.5
CLCNKAP51800 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.67□□□□□ -1.5
CLCNKAP51800 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.67□□□□□ -1.5
CLCNKAP51800 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.67□□□□□ -1.5
CLCNKAP51800 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.67□□□□□ -1.5
CLCNKAP51800 AC011445.2-201ENST00000599274 173 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.67□□□□□ -1.5
CLCNKAP51800 AC093388.1-201ENST00000609166 430 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 AP002371.2-201ENST00000624450 503 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 MIR4302-201ENST00000638058 60 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 AC087565.3-203ENST00000641018 837 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLCNKAP51800 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLCNKAP51800 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLCNKAP51800 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.67□□□□□ -1.5
CLCNKAP51800 AC097063.1-201ENST00000426714 1797 ntBASIC5.67□□□□□ -1.5
CLCNKAP51800 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CLCNKAP51800 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCNKAP51800 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCNKAP51800 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCNKAP51800 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.66□□□□□ -1.5
CLCNKAP51800 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLCNKAP51800 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCNKAP51800 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCNKAP51800 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCNKAP51800 AL513548.1-201ENST00000562904 1724 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLCNKAP51800 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCNKAP51800 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLCNKAP51800 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCNKAP51800 RNA5SP46-201ENST00000362370 120 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 RN7SKP69-201ENST00000365390 305 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCNKAP51800 MIR7-1-201ENST00000384871 110 ntBASIC5.66□□□□□ -1.5
CLCNKAP51800 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms