Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL122023.1-201ENST00000622847 530 ntBASIC7.04□□□□□ -1.28
MRE11P49959 AC073342.3-201ENST00000624211 193 ntBASIC7.04□□□□□ -1.28
MRE11P49959 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.04□□□□□ -1.28
MRE11P49959 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC7.04□□□□□ -1.28
MRE11P49959 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
MRE11P49959 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
MRE11P49959 RALGAPA1P1-201ENST00000443361 6232 ntBASIC7.04□□□□□ -1.28
MRE11P49959 PSMC1P6-201ENST00000477233 1319 ntBASIC7.03□□□□□ -1.28
MRE11P49959 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.03□□□□□ -1.28
MRE11P49959 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
MRE11P49959 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
MRE11P49959 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
MRE11P49959 AP001029.2-203ENST00000589795 4910 ntBASIC7.03□□□□□ -1.28
MRE11P49959 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
MRE11P49959 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
MRE11P49959 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
MRE11P49959 MTCO2P8-201ENST00000412213 658 ntBASIC7.03□□□□□ -1.28
MRE11P49959 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.03□□□□□ -1.28
MRE11P49959 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC7.03□□□□□ -1.28
MRE11P49959 UBE2D3P3-201ENST00000426992 425 ntBASIC7.03□□□□□ -1.28
MRE11P49959 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.03□□□□□ -1.28
MRE11P49959 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC7.03□□□□□ -1.28
MRE11P49959 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC7.03□□□□□ -1.28
MRE11P49959 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.03□□□□□ -1.28
MRE11P49959 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC7.03□□□□□ -1.28
MRE11P49959 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.03□□□□□ -1.28
MRE11P49959 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.03□□□□□ -1.28
MRE11P49959 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC7.03□□□□□ -1.28
MRE11P49959 GLUD1P3-202ENST00000508551 200 ntBASIC7.03□□□□□ -1.28
MRE11P49959 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC7.03□□□□□ -1.28
MRE11P49959 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC7.03□□□□□ -1.28
MRE11P49959 AC090888.2-201ENST00000559765 1144 ntBASIC7.03□□□□□ -1.28
MRE11P49959 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC7.03□□□□□ -1.28
MRE11P49959 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC7.03□□□□□ -1.28
MRE11P49959 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
MRE11P49959 MIR1273E-201ENST00000581165 102 ntBASIC7.03□□□□□ -1.28
MRE11P49959 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
MRE11P49959 AC040904.1-201ENST00000590850 223 ntBASIC7.03□□□□□ -1.28
MRE11P49959 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.03□□□□□ -1.28
MRE11P49959 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.03□□□□□ -1.28
MRE11P49959 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC7.03□□□□□ -1.28
MRE11P49959 AC026367.3-201ENST00000619032 590 ntBASIC7.03□□□□□ -1.28
MRE11P49959 AC127024.6-201ENST00000621598 424 ntBASIC7.03□□□□□ -1.28
MRE11P49959 AC007683.2-201ENST00000624681 714 ntBASIC7.03□□□□□ -1.28
MRE11P49959 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
MRE11P49959 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC7.03□□□□□ -1.28
MRE11P49959 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
MRE11P49959 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
MRE11P49959 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
MRE11P49959 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
MRE11P49959 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
MRE11P49959 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
MRE11P49959 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
MRE11P49959 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.03□□□□□ -1.28
MRE11P49959 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC7.03□□□□□ -1.28
MRE11P49959 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
MRE11P49959 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.02□□□□□ -1.28
MRE11P49959 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC7.02□□□□□ -1.28
MRE11P49959 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.02□□□□□ -1.28
MRE11P49959 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
MRE11P49959 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC7.02□□□□□ -1.29
MRE11P49959 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
MRE11P49959 AL359091.1-201ENST00000449048 1734 ntBASIC7.02□□□□□ -1.29
MRE11P49959 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
MRE11P49959 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.02□□□□□ -1.29
MRE11P49959 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
MRE11P49959 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
MRE11P49959 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
MRE11P49959 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
MRE11P49959 RNU6-609P-201ENST00000365459 107 ntBASIC7.02□□□□□ -1.29
MRE11P49959 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
MRE11P49959 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
MRE11P49959 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
MRE11P49959 CCNB2P1-201ENST00000399411 1150 ntBASIC7.02□□□□□ -1.29
MRE11P49959 RNA5SP198-201ENST00000410376 127 ntBASIC7.02□□□□□ -1.29
MRE11P49959 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC7.02□□□□□ -1.29
MRE11P49959 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC7.02□□□□□ -1.29
MRE11P49959 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.02□□□□□ -1.29
MRE11P49959 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.02□□□□□ -1.29
MRE11P49959 AC017019.1-201ENST00000426129 261 ntBASIC7.02□□□□□ -1.29
MRE11P49959 NPM1P22-201ENST00000427761 952 ntBASIC7.02□□□□□ -1.29
MRE11P49959 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.02□□□□□ -1.29
MRE11P49959 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC7.02□□□□□ -1.29
MRE11P49959 RPL5P7-201ENST00000444235 813 ntBASIC7.02□□□□□ -1.29
MRE11P49959 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.02□□□□□ -1.29
MRE11P49959 RPL31P53-201ENST00000457065 348 ntBASIC7.02□□□□□ -1.29
MRE11P49959 RN7SL197P-201ENST00000466981 299 ntBASIC7.02□□□□□ -1.29
MRE11P49959 RPL32P9-201ENST00000487963 407 ntBASIC7.02□□□□□ -1.29
MRE11P49959 PDCL3P4-201ENST00000489621 720 ntBASIC7.02□□□□□ -1.29
MRE11P49959 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.02□□□□□ -1.29
MRE11P49959 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC7.02□□□□□ -1.29
MRE11P49959 AC119751.5-201ENST00000514077 770 ntBASIC7.02□□□□□ -1.29
MRE11P49959 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.02□□□□□ -1.29
MRE11P49959 VTA1P2-201ENST00000520205 911 ntBASIC7.02□□□□□ -1.29
MRE11P49959 AC138832.1-201ENST00000522871 556 ntBASIC7.02□□□□□ -1.29
MRE11P49959 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC7.02□□□□□ -1.29
MRE11P49959 AC130364.2-201ENST00000528639 604 ntBASIC7.02□□□□□ -1.29
MRE11P49959 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
MRE11P49959 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC7.02□□□□□ -1.29
MRE11P49959 YWHAZP1-201ENST00000556286 722 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms