Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC096586.2-201ENST00000610260 441 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.9□□□□□ -1.63
CX3CR1P49238 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.9□□□□□ -1.63
CX3CR1P49238 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CR1P49238 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.9□□□□□ -1.63
CX3CR1P49238 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CR1P49238 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.9□□□□□ -1.63
CX3CR1P49238 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CR1P49238 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.9□□□□□ -1.63
CX3CR1P49238 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CR1P49238 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CR1P49238 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CR1P49238 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.63
CX3CR1P49238 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CR1P49238 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
CX3CR1P49238 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CX3CR1P49238 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CX3CR1P49238 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
CX3CR1P49238 AC020633.1-201ENST00000468439 2247 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 AC018809.2-201ENST00000602436 3823 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 AC015689.2-201ENST00000528172 1738 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
CX3CR1P49238 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CX3CR1P49238 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 RMRPP5-201ENST00000411156 267 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 AC066692.1-201ENST00000421721 457 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.89□□□□□ -1.63
CX3CR1P49238 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.89□□□□□ -1.63
CX3CR1P49238 AL512637.1-201ENST00000439523 1231 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.89□□□□□ -1.63
CX3CR1P49238 IGBP1P3-201ENST00000447449 1000 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 AC239798.3-201ENST00000454459 408 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 RN7SL188P-201ENST00000469842 285 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.89□□□□□ -1.63
CX3CR1P49238 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.89□□□□□ -1.63
CX3CR1P49238 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.89□□□□□ -1.63
CX3CR1P49238 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.89□□□□□ -1.63
CX3CR1P49238 AC008126.1-201ENST00000549019 480 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.89□□□□□ -1.63
CX3CR1P49238 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.89□□□□□ -1.63
CX3CR1P49238 AC015802.2-201ENST00000589690 189 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 AC063977.5-201ENST00000601044 974 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 QTRT1P1-201ENST00000604344 1078 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 OR51C1P-201ENST00000608504 942 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 AL139124.1-201ENST00000609123 421 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 FO681491.1-202ENST00000623392 737 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 AC087565.3-203ENST00000641018 837 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.89□□□□□ -1.63
CX3CR1P49238 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.89□□□□□ -1.63
CX3CR1P49238 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 AC079097.1-201ENST00000512187 1399 ntBASIC4.89□□□□□ -1.63
CX3CR1P49238 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CR1P49238 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CR1P49238 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.88□□□□□ -1.63
CX3CR1P49238 AC097063.1-201ENST00000426714 1797 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.88□□□□□ -1.63
CX3CR1P49238 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CR1P49238 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.88□□□□□ -1.63
CX3CR1P49238 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CR1P49238 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.88□□□□□ -1.63
CX3CR1P49238 MT-RNR2-201ENST00000387347 1559 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.88□□□□□ -1.63
CX3CR1P49238 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.88□□□□□ -1.63
CX3CR1P49238 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CR1P49238 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CX3CR1P49238 SNORA64.1-201ENST00000362600 132 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 RN7SKP187-201ENST00000365536 330 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 OR7E101P-201ENST00000400428 513 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 AL009179.1-201ENST00000406085 265 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 AC245060.4-201ENST00000413293 1121 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.88□□□□□ -1.63
CX3CR1P49238 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.88□□□□□ -1.63
CX3CR1P49238 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.88□□□□□ -1.63
CX3CR1P49238 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.88□□□□□ -1.63
CX3CR1P49238 RIMKLBP2-201ENST00000424737 654 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 RPL7P56-201ENST00000429441 717 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.88□□□□□ -1.63
CX3CR1P49238 AL596266.1-201ENST00000448132 400 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 HLA-DPA3-207ENST00000454398 229 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 AC087672.1-201ENST00000479876 766 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 RPS3AP15-201ENST00000483874 781 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 EIF3LP3-201ENST00000495197 822 ntBASIC4.88□□□□□ -1.63
CX3CR1P49238 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.88□□□□□ -1.63
CX3CR1P49238 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.88□□□□□ -1.63
CX3CR1P49238 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms