Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-1P43699 AC093664.1-201ENST00000511779 289 ntBASIC4.79□□□□□ -1.64
NKX2-1P43699 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-1P43699 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.79□□□□□ -1.64
NKX2-1P43699 HMGN1P15-201ENST00000513870 295 ntBASIC4.79□□□□□ -1.64
NKX2-1P43699 MIR2117-201ENST00000516780 80 ntBASIC4.79□□□□□ -1.64
NKX2-1P43699 SNORA76.2-201ENST00000517095 137 ntBASIC4.79□□□□□ -1.64
NKX2-1P43699 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX2-1P43699 CYCSP25-201ENST00000525280 316 ntBASIC4.79□□□□□ -1.64
NKX2-1P43699 OR9G2P-201ENST00000533326 880 ntBASIC4.79□□□□□ -1.64
NKX2-1P43699 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
NKX2-1P43699 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-1P43699 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-1P43699 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-1P43699 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-1P43699 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-1P43699 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-1P43699 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-1P43699 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-1P43699 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX2-1P43699 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-1P43699 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-1P43699 AC010503.3-201ENST00000594355 540 ntBASIC4.79□□□□□ -1.64
NKX2-1P43699 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-1P43699 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-1P43699 BNIP3P35-201ENST00000604530 490 ntBASIC4.79□□□□□ -1.64
NKX2-1P43699 HIRAP1-201ENST00000605318 787 ntBASIC4.79□□□□□ -1.64
NKX2-1P43699 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.79□□□□□ -1.64
NKX2-1P43699 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
NKX2-1P43699 MIR6811-201ENST00000620409 58 ntBASIC4.79□□□□□ -1.64
NKX2-1P43699 AC010872.1-201ENST00000624225 675 ntBASIC4.79□□□□□ -1.64
NKX2-1P43699 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-1P43699 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-1P43699 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-1P43699 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-1P43699 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-1P43699 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-1P43699 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-1P43699 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-1P43699 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-1P43699 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-1P43699 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NKX2-1P43699 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX2-1P43699 FANCD2P2-201ENST00000437591 1400 ntBASIC4.79□□□□□ -1.64
NKX2-1P43699 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-1P43699 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-1P43699 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-1P43699 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NKX2-1P43699 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
NKX2-1P43699 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-1P43699 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-1P43699 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-1P43699 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-1P43699 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-1P43699 AC004158.1-201ENST00000564508 4319 ntBASIC4.78□□□□□ -1.64
NKX2-1P43699 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-1P43699 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
NKX2-1P43699 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX2-1P43699 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-1P43699 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-1P43699 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-1P43699 RNA5SP91-201ENST00000390902 119 ntBASIC4.78□□□□□ -1.64
NKX2-1P43699 OR10T1P-201ENST00000424327 947 ntBASIC4.78□□□□□ -1.64
NKX2-1P43699 RPL12P12-201ENST00000424633 501 ntBASIC4.78□□□□□ -1.64
NKX2-1P43699 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-1P43699 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-1P43699 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-1P43699 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NKX2-1P43699 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC4.78□□□□□ -1.64
NKX2-1P43699 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-1P43699 RN7SL552P-201ENST00000462094 276 ntBASIC4.78□□□□□ -1.64
NKX2-1P43699 RN7SL393P-201ENST00000463588 296 ntBASIC4.78□□□□□ -1.64
NKX2-1P43699 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX2-1P43699 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.78□□□□□ -1.64
NKX2-1P43699 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX2-1P43699 OR8X1P-201ENST00000534542 869 ntBASIC4.78□□□□□ -1.64
NKX2-1P43699 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-1P43699 NOP56P3-201ENST00000549457 385 ntBASIC4.78□□□□□ -1.64
NKX2-1P43699 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-1P43699 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.78□□□□□ -1.64
NKX2-1P43699 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-1P43699 NANOGP3-201ENST00000605855 286 ntBASIC4.78□□□□□ -1.64
NKX2-1P43699 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-1P43699 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-1P43699 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-1P43699 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NKX2-1P43699 AL590396.2-201ENST00000636511 1041 ntBASIC4.78□□□□□ -1.64
NKX2-1P43699 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-1P43699 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-1P43699 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-1P43699 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
NKX2-1P43699 MAPK10-338ENST00000641647 3362 ntBASIC4.78□□□□□ -1.64
NKX2-1P43699 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-1P43699 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-1P43699 AL360270.2-201ENST00000562952 5985 ntBASIC4.78□□□□□ -1.64
NKX2-1P43699 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NKX2-1P43699 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
NKX2-1P43699 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-1P43699 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
NKX2-1P43699 RBMY1HP-201ENST00000382759 1389 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms