Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.7□□□□□ -1.5
HTTP42858 AC020910.3-201ENST00000603701 874 ntBASIC5.7□□□□□ -1.5
HTTP42858 AC112200.1-201ENST00000625015 234 ntBASIC5.7□□□□□ -1.5
HTTP42858 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HTTP42858 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
HTTP42858 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HTTP42858 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.7□□□□□ -1.5
HTTP42858 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HTTP42858 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.7□□□□□ -1.5
HTTP42858 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HTTP42858 OR6C69P-201ENST00000394268 893 ntBASIC5.7□□□□□ -1.5
HTTP42858 FHP1-201ENST00000442741 703 ntBASIC5.7□□□□□ -1.5
HTTP42858 OR1H1P-201ENST00000448731 937 ntBASIC5.7□□□□□ -1.5
HTTP42858 TCEA1P1-201ENST00000449716 880 ntBASIC5.7□□□□□ -1.5
HTTP42858 AC020779.1-201ENST00000478757 796 ntBASIC5.7□□□□□ -1.5
HTTP42858 AP002812.1-201ENST00000495378 474 ntBASIC5.7□□□□□ -1.5
HTTP42858 AC023424.1-201ENST00000496058 459 ntBASIC5.7□□□□□ -1.5
HTTP42858 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HTTP42858 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HTTP42858 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
HTTP42858 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HTTP42858 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HTTP42858 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HTTP42858 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HTTP42858 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HTTP42858 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HTTP42858 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.7□□□□□ -1.5
HTTP42858 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
HTTP42858 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HTTP42858 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.7□□□□□ -1.5
HTTP42858 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.7□□□□□ -1.5
HTTP42858 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.7□□□□□ -1.5
HTTP42858 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HTTP42858 MYO5A-202ENST00000358212 12220 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HTTP42858 MYO5A-206ENST00000399233 12220 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HTTP42858 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HTTP42858 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HTTP42858 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.69□□□□□ -1.5
HTTP42858 SDAD1P1-202ENST00000524156 2051 ntBASIC5.69□□□□□ -1.5
HTTP42858 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HTTP42858 RNU1-13P-201ENST00000384499 162 ntBASIC5.69□□□□□ -1.5
HTTP42858 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.69□□□□□ -1.5
HTTP42858 RPL12P43-201ENST00000420608 499 ntBASIC5.69□□□□□ -1.5
HTTP42858 AL645608.4-201ENST00000423619 154 ntBASIC5.69□□□□□ -1.5
HTTP42858 OR4C10P-201ENST00000434991 931 ntBASIC5.69□□□□□ -1.5
HTTP42858 CYCSP11-201ENST00000436426 315 ntBASIC5.69□□□□□ -1.5
HTTP42858 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.69□□□□□ -1.5
HTTP42858 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HTTP42858 AC010350.1-201ENST00000504908 231 ntBASIC5.69□□□□□ -1.5
HTTP42858 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.69□□□□□ -1.5
HTTP42858 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.69□□□□□ -1.5
HTTP42858 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC5.69□□□□□ -1.5
HTTP42858 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.69□□□□□ -1.5
HTTP42858 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HTTP42858 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HTTP42858 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.69□□□□□ -1.5
HTTP42858 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
HTTP42858 VPS8-227ENST00000625842 4969 ntAPPRIS P4 TSL 5 BASIC5.69□□□□□ -1.5
HTTP42858 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.69□□□□□ -1.5
HTTP42858 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HTTP42858 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HTTP42858 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC5.69□□□□□ -1.5
HTTP42858 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HTTP42858 AC017079.1-201ENST00000333650 415 ntBASIC5.69□□□□□ -1.5
HTTP42858 RN7SKP224-201ENST00000364140 325 ntBASIC5.69□□□□□ -1.5
HTTP42858 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.69□□□□□ -1.5
HTTP42858 AL445189.1-201ENST00000405722 338 ntBASIC5.69□□□□□ -1.5
HTTP42858 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.69□□□□□ -1.5
HTTP42858 RPS17P2-201ENST00000461663 408 ntBASIC5.69□□□□□ -1.5
HTTP42858 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.69□□□□□ -1.5
HTTP42858 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.69□□□□□ -1.5
HTTP42858 AC007224.1-201ENST00000564410 144 ntBASIC5.69□□□□□ -1.5
HTTP42858 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
HTTP42858 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HTTP42858 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC5.69□□□□□ -1.5
HTTP42858 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.68□□□□□ -1.5
HTTP42858 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
HTTP42858 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HTTP42858 AC006065.1-201ENST00000422539 802 ntBASIC5.68□□□□□ -1.5
HTTP42858 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.68□□□□□ -1.5
HTTP42858 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.68□□□□□ -1.5
HTTP42858 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HTTP42858 AC006133.1-201ENST00000617106 264 ntBASIC5.68□□□□□ -1.5
HTTP42858 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HTTP42858 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
HTTP42858 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
HTTP42858 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.68□□□□□ -1.5
HTTP42858 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.68□□□□□ -1.5
HTTP42858 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.68□□□□□ -1.5
HTTP42858 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HTTP42858 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HTTP42858 UGT2B24P-201ENST00000514441 1597 ntBASIC5.68□□□□□ -1.5
HTTP42858 MAPK10-263ENST00000641052 4307 ntBASIC5.68□□□□□ -1.5
HTTP42858 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HTTP42858 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HTTP42858 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC5.68□□□□□ -1.5
HTTP42858 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.68□□□□□ -1.5
HTTP42858 KNOP1-201ENST00000219837 6432 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HTTP42858 RN7SKP145-201ENST00000363291 303 ntBASIC5.68□□□□□ -1.5
HTTP42858 RNU1-85P-201ENST00000364127 164 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms