Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC021193.1-201ENST00000511607 420 ntBASIC5.61□□□□□ -1.51
FDFT1P37268 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.61□□□□□ -1.51
FDFT1P37268 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.61□□□□□ -1.51
FDFT1P37268 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.61□□□□□ -1.51
FDFT1P37268 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.61□□□□□ -1.51
FDFT1P37268 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.61□□□□□ -1.51
FDFT1P37268 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.61□□□□□ -1.51
FDFT1P37268 AC003985.2-201ENST00000562268 1669 ntBASIC5.61□□□□□ -1.51
FDFT1P37268 AC010487.1-201ENST00000594408 1172 ntBASIC5.61□□□□□ -1.51
FDFT1P37268 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FDFT1P37268 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.61□□□□□ -1.51
FDFT1P37268 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.61□□□□□ -1.51
FDFT1P37268 AC073869.8-201ENST00000641806 335 ntBASIC5.61□□□□□ -1.51
FDFT1P37268 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FDFT1P37268 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FDFT1P37268 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FDFT1P37268 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FDFT1P37268 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.6□□□□□ -1.51
FDFT1P37268 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.6□□□□□ -1.51
FDFT1P37268 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
FDFT1P37268 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.6□□□□□ -1.51
FDFT1P37268 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
FDFT1P37268 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.6□□□□□ -1.51
FDFT1P37268 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
FDFT1P37268 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.6□□□□□ -1.51
FDFT1P37268 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 AC023490.2-201ENST00000359859 470 ntBASIC5.6□□□□□ -1.51
FDFT1P37268 RN7SKP6-201ENST00000364795 319 ntBASIC5.6□□□□□ -1.51
FDFT1P37268 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
FDFT1P37268 OR7E156P-201ENST00000400303 464 ntBASIC5.6□□□□□ -1.51
FDFT1P37268 CBX1P3-201ENST00000413296 527 ntBASIC5.6□□□□□ -1.51
FDFT1P37268 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.6□□□□□ -1.51
FDFT1P37268 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.6□□□□□ -1.51
FDFT1P37268 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
FDFT1P37268 AC092106.1-201ENST00000444291 373 ntBASIC5.6□□□□□ -1.51
FDFT1P37268 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.6□□□□□ -1.51
FDFT1P37268 VDAC2P4-201ENST00000452925 711 ntBASIC5.6□□□□□ -1.51
FDFT1P37268 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.6□□□□□ -1.51
FDFT1P37268 UBFD1P1-201ENST00000473259 814 ntBASIC5.6□□□□□ -1.51
FDFT1P37268 AC006499.4-201ENST00000510947 694 ntBASIC5.6□□□□□ -1.51
FDFT1P37268 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.6□□□□□ -1.51
FDFT1P37268 SNORA43.3-201ENST00000517240 103 ntBASIC5.6□□□□□ -1.51
FDFT1P37268 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
FDFT1P37268 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.6□□□□□ -1.51
FDFT1P37268 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.6□□□□□ -1.51
FDFT1P37268 AC009852.2-201ENST00000567898 485 ntBASIC5.6□□□□□ -1.51
FDFT1P37268 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.6□□□□□ -1.51
FDFT1P37268 AC092944.2-201ENST00000605443 889 ntBASIC5.6□□□□□ -1.51
FDFT1P37268 PPATP2-201ENST00000605635 508 ntBASIC5.6□□□□□ -1.51
FDFT1P37268 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.6□□□□□ -1.51
FDFT1P37268 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.6□□□□□ -1.51
FDFT1P37268 AC008691.1-209ENST00000642094 814 ntBASIC5.6□□□□□ -1.51
FDFT1P37268 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.6□□□□□ -1.51
FDFT1P37268 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
FDFT1P37268 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.6□□□□□ -1.51
FDFT1P37268 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.6□□□□□ -1.51
FDFT1P37268 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FDFT1P37268 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.59□□□□□ -1.51
FDFT1P37268 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FDFT1P37268 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FDFT1P37268 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
FDFT1P37268 Z83820.1-201ENST00000456978 1499 ntBASIC5.59□□□□□ -1.51
FDFT1P37268 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.59□□□□□ -1.51
FDFT1P37268 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
FDFT1P37268 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FDFT1P37268 SSXP3-201ENST00000442971 1300 ntBASIC5.59□□□□□ -1.51
FDFT1P37268 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
FDFT1P37268 VN1R12P-201ENST00000403778 876 ntBASIC5.59□□□□□ -1.51
FDFT1P37268 BX119321.1-201ENST00000428912 797 ntBASIC5.59□□□□□ -1.51
FDFT1P37268 OR6D1P-201ENST00000436165 939 ntBASIC5.59□□□□□ -1.51
FDFT1P37268 AC016772.1-201ENST00000444170 1261 ntBASIC5.59□□□□□ -1.51
FDFT1P37268 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FDFT1P37268 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.59□□□□□ -1.51
FDFT1P37268 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.59□□□□□ -1.51
FDFT1P37268 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
FDFT1P37268 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.59□□□□□ -1.51
FDFT1P37268 SCARNA20.4-201ENST00000516969 131 ntBASIC5.59□□□□□ -1.51
FDFT1P37268 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.59□□□□□ -1.51
FDFT1P37268 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.59□□□□□ -1.51
FDFT1P37268 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.59□□□□□ -1.51
FDFT1P37268 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.59□□□□□ -1.51
FDFT1P37268 MRPS21P7-201ENST00000566937 238 ntBASIC5.59□□□□□ -1.51
FDFT1P37268 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
FDFT1P37268 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
FDFT1P37268 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms