Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD12P35452 AC097461.1-201ENST00000568928 2821 ntBASIC6.1□□□□□ -1.43
HOXD12P35452 MRRFP1-201ENST00000435941 1675 ntBASIC6.1□□□□□ -1.43
HOXD12P35452 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HOXD12P35452 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXD12P35452 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HOXD12P35452 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD12P35452 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HOXD12P35452 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXD12P35452 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXD12P35452 AC027088.4-201ENST00000611559 1947 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXD12P35452 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
HOXD12P35452 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
HOXD12P35452 MTND4P9-201ENST00000507819 1346 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 AC022325.1-201ENST00000502748 2199 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXD12P35452 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXD12P35452 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXD12P35452 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
HOXD12P35452 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXD12P35452 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HOXD12P35452 MIR375-201ENST00000362103 64 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXD12P35452 RNU6-925P-201ENST00000384629 104 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 MIR620-201ENST00000385232 95 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
HOXD12P35452 CCNB2P1-201ENST00000399411 1150 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 AL391361.1-201ENST00000405580 489 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 OR3A2-201ENST00000408891 1076 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 AC245060.4-201ENST00000413293 1121 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXD12P35452 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXD12P35452 RPL34P3-201ENST00000421454 338 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 AL139415.1-201ENST00000424862 352 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXD12P35452 CLUHP1-201ENST00000435012 1190 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 PCBP2P1-201ENST00000437262 977 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXD12P35452 AL163193.1-201ENST00000444895 788 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 RPL36AP39-201ENST00000445859 318 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 VN1R38P-201ENST00000450265 887 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXD12P35452 GEMIN2P1-201ENST00000454246 752 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 RPS26P39-201ENST00000469206 341 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 AC006539.1-201ENST00000481419 501 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 AC119751.4-201ENST00000507498 357 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXD12P35452 MTATP6P9-201ENST00000515039 680 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 AC097486.1-201ENST00000515331 210 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 RNU6-415P-201ENST00000516252 97 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 Y_RNA.710-201ENST00000516975 110 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXD12P35452 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXD12P35452 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXD12P35452 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXD12P35452 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXD12P35452 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXD12P35452 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HOXD12P35452 AC109635.6-201ENST00000525487 1113 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
HOXD12P35452 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXD12P35452 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXD12P35452 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXD12P35452 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXD12P35452 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXD12P35452 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXD12P35452 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
HOXD12P35452 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXD12P35452 BNIP3P40-201ENST00000596017 556 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 AL359704.2-201ENST00000604335 521 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 BNIP3P31-201ENST00000604515 566 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXD12P35452 AL645933.2-201ENST00000606743 1207 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXD12P35452 AL391834.2-201ENST00000609982 546 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 RNA5SP439-201ENST00000617595 124 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HOXD12P35452 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HOXD12P35452 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HOXD12P35452 OR8G3P-202ENST00000641572 1255 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 AL731556.1-201ENST00000394628 3711 ntBASIC6.09□□□□□ -1.43
HOXD12P35452 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXD12P35452 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXD12P35452 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXD12P35452 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXD12P35452 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.09□□□□□ -1.43
HOXD12P35452 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HOXD12P35452 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
HOXD12P35452 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.09□□□□□ -1.44
HOXD12P35452 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HOXD12P35452 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HOXD12P35452 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD12P35452 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXD12P35452 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD12P35452 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXD12P35452 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXD12P35452 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXD12P35452 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HOXD12P35452 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms