Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RORAP35398 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RORAP35398 AC010266.2-201ENST00000564741 3255 ntBASIC5.42□□□□□ -1.54
RORAP35398 AL034546.1-201ENST00000623740 3693 ntBASIC5.42□□□□□ -1.54
RORAP35398 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RORAP35398 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RORAP35398 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RORAP35398 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RORAP35398 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RORAP35398 AP004607.3-201ENST00000530354 3915 ntBASIC5.42□□□□□ -1.54
RORAP35398 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RORAP35398 AC114786.1-201ENST00000512892 1415 ntBASIC5.41□□□□□ -1.54
RORAP35398 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RORAP35398 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.41□□□□□ -1.54
RORAP35398 AP005432.1-201ENST00000580891 3485 ntBASIC5.41□□□□□ -1.54
RORAP35398 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.41□□□□□ -1.54
RORAP35398 RNA5SP453-201ENST00000362503 119 ntBASIC5.41□□□□□ -1.54
RORAP35398 RNA5SP30-201ENST00000365552 115 ntBASIC5.41□□□□□ -1.54
RORAP35398 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RORAP35398 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RORAP35398 AL121977.1-201ENST00000401636 979 ntBASIC5.41□□□□□ -1.54
RORAP35398 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.41□□□□□ -1.54
RORAP35398 RNU6-233P-201ENST00000410845 141 ntBASIC5.41□□□□□ -1.54
RORAP35398 RMRPP5-201ENST00000411156 267 ntBASIC5.41□□□□□ -1.54
RORAP35398 RNU2-22P-201ENST00000411266 212 ntBASIC5.41□□□□□ -1.54
RORAP35398 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RORAP35398 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.41□□□□□ -1.54
RORAP35398 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.41□□□□□ -1.54
RORAP35398 AL450996.1-201ENST00000445574 1202 ntBASIC5.41□□□□□ -1.54
RORAP35398 RN7SL629P-201ENST00000489622 285 ntBASIC5.41□□□□□ -1.54
RORAP35398 EIF3LP3-201ENST00000495197 822 ntBASIC5.41□□□□□ -1.54
RORAP35398 AC108693.1-201ENST00000496068 432 ntBASIC5.41□□□□□ -1.54
RORAP35398 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.41□□□□□ -1.54
RORAP35398 AC105384.2-201ENST00000508433 640 ntBASIC5.41□□□□□ -1.54
RORAP35398 AC078899.1-201ENST00000521432 1185 ntBASIC5.41□□□□□ -1.54
RORAP35398 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.41□□□□□ -1.54
RORAP35398 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.41□□□□□ -1.54
RORAP35398 AC010503.3-201ENST00000594355 540 ntBASIC5.41□□□□□ -1.54
RORAP35398 NANOGP3-201ENST00000605855 286 ntBASIC5.41□□□□□ -1.54
RORAP35398 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.41□□□□□ -1.54
RORAP35398 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RORAP35398 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RORAP35398 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.41□□□□□ -1.54
RORAP35398 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
RORAP35398 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RORAP35398 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
RORAP35398 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RORAP35398 AC005005.4-201ENST00000623789 16698 ntBASIC5.41□□□□□ -1.54
RORAP35398 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RORAP35398 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RORAP35398 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
RORAP35398 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RORAP35398 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RORAP35398 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RORAP35398 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RORAP35398 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.4□□□□□ -1.54
RORAP35398 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.4□□□□□ -1.54
RORAP35398 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RORAP35398 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RORAP35398 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RORAP35398 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RORAP35398 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RORAP35398 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.4□□□□□ -1.54
RORAP35398 RN7SKP162-201ENST00000363605 345 ntBASIC5.4□□□□□ -1.54
RORAP35398 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.4□□□□□ -1.54
RORAP35398 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.4□□□□□ -1.54
RORAP35398 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.4□□□□□ -1.54
RORAP35398 CRIP1P1-201ENST00000427567 185 ntBASIC5.4□□□□□ -1.54
RORAP35398 AC012075.1-201ENST00000436549 580 ntBASIC5.4□□□□□ -1.54
RORAP35398 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.4□□□□□ -1.54
RORAP35398 SPRYD7P1-201ENST00000443861 570 ntBASIC5.4□□□□□ -1.54
RORAP35398 RN7SL184P-201ENST00000488308 297 ntBASIC5.4□□□□□ -1.54
RORAP35398 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.4□□□□□ -1.54
RORAP35398 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.4□□□□□ -1.54
RORAP35398 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.4□□□□□ -1.54
RORAP35398 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.4□□□□□ -1.54
RORAP35398 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RORAP35398 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.4□□□□□ -1.54
RORAP35398 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.4□□□□□ -1.54
RORAP35398 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.4□□□□□ -1.54
RORAP35398 HSPE1P2-201ENST00000554777 306 ntBASIC5.4□□□□□ -1.54
RORAP35398 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RORAP35398 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.4□□□□□ -1.54
RORAP35398 AC009852.2-201ENST00000567898 485 ntBASIC5.4□□□□□ -1.54
RORAP35398 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.4□□□□□ -1.54
RORAP35398 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.4□□□□□ -1.54
RORAP35398 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.4□□□□□ -1.54
RORAP35398 AC006363.1-201ENST00000603806 463 ntBASIC5.4□□□□□ -1.54
RORAP35398 AC099654.6-201ENST00000636487 512 ntBASIC5.4□□□□□ -1.54
RORAP35398 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RORAP35398 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
RORAP35398 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
RORAP35398 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RORAP35398 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.4□□□□□ -1.55
RORAP35398 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RORAP35398 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.4□□□□□ -1.55
RORAP35398 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.4□□□□□ -1.55
RORAP35398 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.39□□□□□ -1.55
RORAP35398 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RORAP35398 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms