Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RPS24P7-201ENST00000416921 246 ntBASIC8.04□□□□□ -1.12
RXRBP28702 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC8.04□□□□□ -1.12
RXRBP28702 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC8.04□□□□□ -1.12
RXRBP28702 AL049745.1-201ENST00000433953 286 ntBASIC8.04□□□□□ -1.12
RXRBP28702 MTND1P4-201ENST00000435196 415 ntBASIC8.04□□□□□ -1.12
RXRBP28702 AC004022.1-201ENST00000447766 1066 ntBASIC8.04□□□□□ -1.12
RXRBP28702 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC8.04□□□□□ -1.12
RXRBP28702 AC073387.1-201ENST00000453261 709 ntBASIC8.04□□□□□ -1.12
RXRBP28702 AC023245.1-201ENST00000468501 517 ntBASIC8.04□□□□□ -1.12
RXRBP28702 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RXRBP28702 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC8.04□□□□□ -1.12
RXRBP28702 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC8.04□□□□□ -1.12
RXRBP28702 RNU5A-7P-201ENST00000515979 116 ntBASIC8.04□□□□□ -1.12
RXRBP28702 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC8.04□□□□□ -1.12
RXRBP28702 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC8.04□□□□□ -1.12
RXRBP28702 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC8.04□□□□□ -1.12
RXRBP28702 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC8.04□□□□□ -1.12
RXRBP28702 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC8.04□□□□□ -1.12
RXRBP28702 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC8.04□□□□□ -1.12
RXRBP28702 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC8.04□□□□□ -1.12
RXRBP28702 DUXAP6-201ENST00000553858 601 ntBASIC8.04□□□□□ -1.12
RXRBP28702 SNORA70D-201ENST00000578836 135 ntBASIC8.04□□□□□ -1.12
RXRBP28702 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC8.04□□□□□ -1.12
RXRBP28702 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC8.04□□□□□ -1.12
RXRBP28702 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC8.04□□□□□ -1.12
RXRBP28702 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC8.04□□□□□ -1.12
RXRBP28702 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.04□□□□□ -1.12
RXRBP28702 AC017037.3-201ENST00000625016 472 ntBASIC8.04□□□□□ -1.12
RXRBP28702 AC099654.13-201ENST00000639774 207 ntBASIC8.04□□□□□ -1.12
RXRBP28702 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RXRBP28702 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
RXRBP28702 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.04□□□□□ -1.12
RXRBP28702 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RXRBP28702 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RXRBP28702 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RXRBP28702 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
RXRBP28702 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RXRBP28702 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RXRBP28702 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RXRBP28702 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RXRBP28702 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RXRBP28702 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC8.03□□□□□ -1.12
RXRBP28702 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RXRBP28702 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RXRBP28702 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
RXRBP28702 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RXRBP28702 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RXRBP28702 AC119674.1-202ENST00000641333 1860 ntBASIC8.03□□□□□ -1.12
RXRBP28702 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC8.03□□□□□ -1.12
RXRBP28702 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
RXRBP28702 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC8.03□□□□□ -1.12
RXRBP28702 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
RXRBP28702 CYB5AP4-201ENST00000396692 399 ntBASIC8.03□□□□□ -1.12
RXRBP28702 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC8.03□□□□□ -1.12
RXRBP28702 HIGD1AP4-201ENST00000430194 280 ntBASIC8.03□□□□□ -1.12
RXRBP28702 AC006994.1-201ENST00000438212 839 ntBASIC8.03□□□□□ -1.12
RXRBP28702 CR769776.1-201ENST00000441254 787 ntBASIC8.03□□□□□ -1.12
RXRBP28702 MTND4P18-201ENST00000447010 465 ntBASIC8.03□□□□□ -1.12
RXRBP28702 RANP1-206ENST00000455094 651 ntBASIC8.03□□□□□ -1.12
RXRBP28702 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC8.03□□□□□ -1.12
RXRBP28702 RN7SL870P-201ENST00000460111 296 ntBASIC8.03□□□□□ -1.12
RXRBP28702 STRADBP1-201ENST00000478954 1281 ntBASIC8.03□□□□□ -1.12
RXRBP28702 NPM1P17-201ENST00000479221 602 ntBASIC8.03□□□□□ -1.12
RXRBP28702 EIF1P7-201ENST00000487533 337 ntBASIC8.03□□□□□ -1.12
RXRBP28702 PGAM1P13-201ENST00000507497 754 ntBASIC8.03□□□□□ -1.12
RXRBP28702 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC8.03□□□□□ -1.12
RXRBP28702 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC8.03□□□□□ -1.12
RXRBP28702 SNORA19.3-201ENST00000516165 130 ntBASIC8.03□□□□□ -1.12
RXRBP28702 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC8.03□□□□□ -1.12
RXRBP28702 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RXRBP28702 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.03□□□□□ -1.12
RXRBP28702 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC8.03□□□□□ -1.12
RXRBP28702 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC8.03□□□□□ -1.12
RXRBP28702 AC124856.1-201ENST00000600819 896 ntBASIC8.03□□□□□ -1.12
RXRBP28702 AC095055.1-201ENST00000603472 1113 ntBASIC8.03□□□□□ -1.12
RXRBP28702 AC107952.2-201ENST00000606048 486 ntBASIC8.03□□□□□ -1.12
RXRBP28702 AC096586.2-201ENST00000610260 441 ntBASIC8.03□□□□□ -1.12
RXRBP28702 AC004241.3-201ENST00000611728 517 ntBASIC8.03□□□□□ -1.12
RXRBP28702 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC8.03□□□□□ -1.12
RXRBP28702 AC008759.3-201ENST00000613300 508 ntBASIC8.03□□□□□ -1.12
RXRBP28702 AC096861.1-201ENST00000616652 240 ntBASIC8.03□□□□□ -1.12
RXRBP28702 MIR8089-201ENST00000620165 82 ntBASIC8.03□□□□□ -1.12
RXRBP28702 AC092192.1-201ENST00000633154 1018 ntBASIC8.03□□□□□ -1.12
RXRBP28702 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
RXRBP28702 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
RXRBP28702 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC8.03□□□□□ -1.12
RXRBP28702 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC8.03□□□□□ -1.12
RXRBP28702 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.03□□□□□ -1.12
RXRBP28702 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
RXRBP28702 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC8.03□□□□□ -1.12
RXRBP28702 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
RXRBP28702 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
RXRBP28702 AC007938.2-201ENST00000604666 2634 ntBASIC8.02□□□□□ -1.12
RXRBP28702 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RXRBP28702 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RXRBP28702 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
RXRBP28702 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RXRBP28702 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RXRBP28702 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
RXRBP28702 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms