Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CCL1P22362 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCL1P22362 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
CCL1P22362 AC011755.1-201ENST00000623763 2049 ntBASIC4.67□□□□□ -1.66
CCL1P22362 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCL1P22362 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCL1P22362 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCL1P22362 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.67□□□□□ -1.66
CCL1P22362 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCL1P22362 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCL1P22362 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCL1P22362 RPL34P3-201ENST00000421454 338 ntBASIC4.67□□□□□ -1.66
CCL1P22362 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.67□□□□□ -1.66
CCL1P22362 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.67□□□□□ -1.66
CCL1P22362 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.67□□□□□ -1.66
CCL1P22362 AC090018.1-201ENST00000434369 367 ntBASIC4.67□□□□□ -1.66
CCL1P22362 Z84478.1-201ENST00000438230 1219 ntBASIC4.67□□□□□ -1.66
CCL1P22362 DNAJA1P5-201ENST00000440278 943 ntBASIC4.67□□□□□ -1.66
CCL1P22362 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.67□□□□□ -1.66
CCL1P22362 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.67□□□□□ -1.66
CCL1P22362 AC092754.1-201ENST00000472975 479 ntBASIC4.67□□□□□ -1.66
CCL1P22362 NPM1P28-201ENST00000492269 840 ntBASIC4.67□□□□□ -1.66
CCL1P22362 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.67□□□□□ -1.66
CCL1P22362 HMGB1P44-201ENST00000508597 572 ntBASIC4.67□□□□□ -1.66
CCL1P22362 AC006499.4-201ENST00000510947 694 ntBASIC4.67□□□□□ -1.66
CCL1P22362 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.67□□□□□ -1.66
CCL1P22362 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.67□□□□□ -1.66
CCL1P22362 CYCSP22-201ENST00000517555 339 ntBASIC4.67□□□□□ -1.66
CCL1P22362 AC024405.1-201ENST00000532521 1042 ntBASIC4.67□□□□□ -1.66
CCL1P22362 NANOGNBP2-201ENST00000544753 553 ntBASIC4.67□□□□□ -1.66
CCL1P22362 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.67□□□□□ -1.66
CCL1P22362 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
CCL1P22362 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.67□□□□□ -1.66
CCL1P22362 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCL1P22362 MIR6780B-201ENST00000610307 79 ntBASIC4.67□□□□□ -1.66
CCL1P22362 AC007683.2-201ENST00000624681 714 ntBASIC4.67□□□□□ -1.66
CCL1P22362 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.67□□□□□ -1.66
CCL1P22362 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCL1P22362 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.67□□□□□ -1.66
CCL1P22362 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCL1P22362 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCL1P22362 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCL1P22362 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.66□□□□□ -1.66
CCL1P22362 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
CCL1P22362 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.66□□□□□ -1.66
CCL1P22362 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCL1P22362 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCL1P22362 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.66□□□□□ -1.66
CCL1P22362 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.66□□□□□ -1.66
CCL1P22362 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.66□□□□□ -1.66
CCL1P22362 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.66□□□□□ -1.66
CCL1P22362 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.66□□□□□ -1.66
CCL1P22362 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.66□□□□□ -1.66
CCL1P22362 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCL1P22362 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCL1P22362 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CCL1P22362 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCL1P22362 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
CCL1P22362 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCL1P22362 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCL1P22362 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
CCL1P22362 RNA5SP46-201ENST00000362370 120 ntBASIC4.66□□□□□ -1.66
CCL1P22362 RN7SKP28-201ENST00000364770 305 ntBASIC4.66□□□□□ -1.66
CCL1P22362 RN7SKP153-201ENST00000365026 316 ntBASIC4.66□□□□□ -1.66
CCL1P22362 RNU4-2-201ENST00000365668 141 ntBASIC4.66□□□□□ -1.66
CCL1P22362 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCL1P22362 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.66□□□□□ -1.66
CCL1P22362 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCL1P22362 AC019185.1-201ENST00000442718 389 ntBASIC4.66□□□□□ -1.66
CCL1P22362 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.66□□□□□ -1.66
CCL1P22362 DNAJB5P1-201ENST00000454004 806 ntBASIC4.66□□□□□ -1.66
CCL1P22362 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCL1P22362 AC022133.1-201ENST00000490961 571 ntBASIC4.66□□□□□ -1.66
CCL1P22362 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.66□□□□□ -1.66
CCL1P22362 ENPP7P11-201ENST00000505915 627 ntBASIC4.66□□□□□ -1.66
CCL1P22362 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.66□□□□□ -1.66
CCL1P22362 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCL1P22362 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.66□□□□□ -1.66
CCL1P22362 AC106730.2-201ENST00000566641 540 ntBASIC4.66□□□□□ -1.66
CCL1P22362 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.66□□□□□ -1.66
CCL1P22362 PRPF19P1-201ENST00000584766 898 ntBASIC4.66□□□□□ -1.66
CCL1P22362 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.66□□□□□ -1.66
CCL1P22362 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.66□□□□□ -1.66
CCL1P22362 AC079315.1-201ENST00000602952 623 ntBASIC4.66□□□□□ -1.66
CCL1P22362 AL138895.2-201ENST00000603019 178 ntBASIC4.66□□□□□ -1.66
CCL1P22362 AL034374.2-201ENST00000605281 548 ntBASIC4.66□□□□□ -1.66
CCL1P22362 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.66□□□□□ -1.66
CCL1P22362 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.66□□□□□ -1.66
CCL1P22362 CU639417.4-201ENST00000623928 207 ntBASIC4.66□□□□□ -1.66
CCL1P22362 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.66□□□□□ -1.66
CCL1P22362 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.66□□□□□ -1.66
CCL1P22362 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCL1P22362 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCL1P22362 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.66□□□□□ -1.66
CCL1P22362 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCL1P22362 AC022417.1-201ENST00000624768 1303 ntBASIC4.66□□□□□ -1.66
CCL1P22362 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCL1P22362 AL360270.2-201ENST00000562952 5985 ntBASIC4.66□□□□□ -1.66
CCL1P22362 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCL1P22362 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms