Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC8.24□□□□□ -1.09
COL9A1P20849 OR52I1-201ENST00000450052 1050 ntBASIC8.24□□□□□ -1.09
COL9A1P20849 RN7SL74P-201ENST00000464966 299 ntBASIC8.24□□□□□ -1.09
COL9A1P20849 RN7SL221P-201ENST00000466190 281 ntBASIC8.24□□□□□ -1.09
COL9A1P20849 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC8.24□□□□□ -1.09
COL9A1P20849 AC025164.1-201ENST00000496249 478 ntBASIC8.24□□□□□ -1.09
COL9A1P20849 AC113208.1-201ENST00000497944 318 ntBASIC8.24□□□□□ -1.09
COL9A1P20849 SUMO2P7-201ENST00000511179 285 ntBASIC8.24□□□□□ -1.09
COL9A1P20849 RNU6-1003P-201ENST00000517099 105 ntBASIC8.24□□□□□ -1.09
COL9A1P20849 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC8.24□□□□□ -1.09
COL9A1P20849 AC009812.2-201ENST00000517657 457 ntBASIC8.24□□□□□ -1.09
COL9A1P20849 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC8.24□□□□□ -1.09
COL9A1P20849 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC8.24□□□□□ -1.09
COL9A1P20849 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC8.24□□□□□ -1.09
COL9A1P20849 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC8.24□□□□□ -1.09
COL9A1P20849 AC015982.1-201ENST00000608113 465 ntBASIC8.24□□□□□ -1.09
COL9A1P20849 AC040978.1-201ENST00000617244 1282 ntBASIC8.24□□□□□ -1.09
COL9A1P20849 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC8.24□□□□□ -1.09
COL9A1P20849 RMST_9.1-201ENST00000619945 193 ntBASIC8.24□□□□□ -1.09
COL9A1P20849 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC8.24□□□□□ -1.09
COL9A1P20849 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC8.24□□□□□ -1.09
COL9A1P20849 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL9A1P20849 ZNF185-204ENST00000370268 4305 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL9A1P20849 WISP3-204ENST00000368666 2700 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
COL9A1P20849 SRPK2-214ENST00000489828 2560 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL9A1P20849 RIPOR2-202ENST00000378023 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL9A1P20849 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC8.24□□□□□ -1.09
COL9A1P20849 GAD1-217ENST00000625689 3700 ntTSL 5 BASIC8.24□□□□□ -1.09
COL9A1P20849 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
COL9A1P20849 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
COL9A1P20849 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL9A1P20849 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
COL9A1P20849 AL356289.3-201ENST00000640049 2669 ntBASIC8.24□□□□□ -1.09
COL9A1P20849 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC8.24□□□□□ -1.09
COL9A1P20849 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
COL9A1P20849 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC8.24□□□□□ -1.09
COL9A1P20849 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC8.24□□□□□ -1.09
COL9A1P20849 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL9A1P20849 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
COL9A1P20849 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
COL9A1P20849 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
COL9A1P20849 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC8.23□□□□□ -1.09
COL9A1P20849 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
COL9A1P20849 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC8.23□□□□□ -1.09
COL9A1P20849 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC8.23□□□□□ -1.09
COL9A1P20849 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 COX6CP17-201ENST00000421389 185 ntBASIC8.23□□□□□ -1.09
COL9A1P20849 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC8.23□□□□□ -1.09
COL9A1P20849 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC8.23□□□□□ -1.09
COL9A1P20849 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC8.23□□□□□ -1.09
COL9A1P20849 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC8.23□□□□□ -1.09
COL9A1P20849 AL354714.5-201ENST00000450131 590 ntBASIC8.23□□□□□ -1.09
COL9A1P20849 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC8.23□□□□□ -1.09
COL9A1P20849 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC8.23□□□□□ -1.09
COL9A1P20849 AC104634.1-201ENST00000452720 462 ntBASIC8.23□□□□□ -1.09
COL9A1P20849 YWHAEP1-201ENST00000453697 763 ntBASIC8.23□□□□□ -1.09
COL9A1P20849 MEMO1P3-201ENST00000459811 302 ntBASIC8.23□□□□□ -1.09
COL9A1P20849 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 OR52H2P-201ENST00000514607 902 ntBASIC8.23□□□□□ -1.09
COL9A1P20849 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC8.23□□□□□ -1.09
COL9A1P20849 RNU6-764P-201ENST00000516396 105 ntBASIC8.23□□□□□ -1.09
COL9A1P20849 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC8.23□□□□□ -1.09
COL9A1P20849 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC8.23□□□□□ -1.09
COL9A1P20849 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC8.23□□□□□ -1.09
COL9A1P20849 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC8.23□□□□□ -1.09
COL9A1P20849 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC8.23□□□□□ -1.09
COL9A1P20849 RN7SL154P-201ENST00000578043 324 ntBASIC8.23□□□□□ -1.09
COL9A1P20849 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC8.23□□□□□ -1.09
COL9A1P20849 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC8.23□□□□□ -1.09
COL9A1P20849 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC8.23□□□□□ -1.09
COL9A1P20849 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC8.23□□□□□ -1.09
COL9A1P20849 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC8.23□□□□□ -1.09
COL9A1P20849 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC8.23□□□□□ -1.09
COL9A1P20849 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC8.23□□□□□ -1.09
COL9A1P20849 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 EIF4BP6-201ENST00000431936 1828 ntBASIC8.23□□□□□ -1.09
COL9A1P20849 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8.23□□□□□ -1.09
COL9A1P20849 TCF4-207ENST00000540999 2572 ntTSL 2 BASIC8.23□□□□□ -1.09
COL9A1P20849 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
COL9A1P20849 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
COL9A1P20849 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 ZNF35-201ENST00000296092 2503 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
COL9A1P20849 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
COL9A1P20849 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
COL9A1P20849 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC8.22□□□□□ -1.09
COL9A1P20849 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
COL9A1P20849 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms