Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.7□□□□□ -1.18
LMNB1P20700 AL669831.5-218ENST00000591702 1873 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
LMNB1P20700 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
LMNB1P20700 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
LMNB1P20700 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.7□□□□□ -1.18
LMNB1P20700 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
LMNB1P20700 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LMNB1P20700 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
LMNB1P20700 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
LMNB1P20700 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
LMNB1P20700 PSG10P-201ENST00000501199 1500 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 RNU1-19P-201ENST00000363306 165 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 RNU6-1214P-201ENST00000363650 109 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 Y_RNA.436-201ENST00000384097 102 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
LMNB1P20700 SPTLC1P2-201ENST00000407089 121 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LMNB1P20700 VN1R31P-201ENST00000417498 730 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC7.7□□□□□ -1.18
LMNB1P20700 NIPA2P1-201ENST00000426223 976 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 AL160175.1-201ENST00000428124 247 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 RPL34P27-201ENST00000428810 349 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 OR3D1P-201ENST00000438288 955 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 SUMO2P3-201ENST00000438311 288 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 GAPDHP58-201ENST00000438477 1006 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LMNB1P20700 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.7□□□□□ -1.18
LMNB1P20700 AC069540.1-201ENST00000446320 988 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.7□□□□□ -1.18
LMNB1P20700 AC022415.1-202ENST00000486612 523 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 RPL21P131-201ENST00000497298 483 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 AC090958.1-201ENST00000511122 351 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC7.7□□□□□ -1.18
LMNB1P20700 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC7.7□□□□□ -1.18
LMNB1P20700 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC7.7□□□□□ -1.18
LMNB1P20700 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LMNB1P20700 MTCO2P15-201ENST00000532655 656 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.7□□□□□ -1.18
LMNB1P20700 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC7.7□□□□□ -1.18
LMNB1P20700 LYZ-203ENST00000549690 669 ntTSL 2 BASIC7.7□□□□□ -1.18
LMNB1P20700 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.7□□□□□ -1.18
LMNB1P20700 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.7□□□□□ -1.18
LMNB1P20700 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.7□□□□□ -1.18
LMNB1P20700 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.7□□□□□ -1.18
LMNB1P20700 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
LMNB1P20700 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.7□□□□□ -1.18
LMNB1P20700 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC7.7□□□□□ -1.18
LMNB1P20700 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC7.7□□□□□ -1.18
LMNB1P20700 BUB1P1-201ENST00000603541 607 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 AL158042.1-201ENST00000605338 460 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.7□□□□□ -1.18
LMNB1P20700 AC096708.4-201ENST00000620563 552 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
LMNB1P20700 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.7□□□□□ -1.18
LMNB1P20700 AC116667.2-201ENST00000641075 823 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
LMNB1P20700 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LMNB1P20700 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.7□□□□□ -1.18
LMNB1P20700 AL133243.2-201ENST00000610331 1621 ntBASIC7.7□□□□□ -1.18
LMNB1P20700 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LMNB1P20700 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
LMNB1P20700 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
LMNB1P20700 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LMNB1P20700 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LMNB1P20700 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
LMNB1P20700 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
LMNB1P20700 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LMNB1P20700 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LMNB1P20700 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
LMNB1P20700 AC021755.1-201ENST00000559747 1447 ntBASIC7.69□□□□□ -1.18
LMNB1P20700 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LMNB1P20700 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LMNB1P20700 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
LMNB1P20700 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LMNB1P20700 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
LMNB1P20700 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LMNB1P20700 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LMNB1P20700 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LMNB1P20700 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
LMNB1P20700 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.69□□□□□ -1.18
LMNB1P20700 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
LMNB1P20700 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LMNB1P20700 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
LMNB1P20700 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
LMNB1P20700 RNU4-68P-201ENST00000364314 141 ntBASIC7.69□□□□□ -1.18
LMNB1P20700 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.69□□□□□ -1.18
LMNB1P20700 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.69□□□□□ -1.18
LMNB1P20700 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LMNB1P20700 RPS7P14-201ENST00000426405 583 ntBASIC7.69□□□□□ -1.18
LMNB1P20700 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC7.69□□□□□ -1.18
LMNB1P20700 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC7.69□□□□□ -1.18
LMNB1P20700 DEFA9P-201ENST00000433042 285 ntBASIC7.69□□□□□ -1.18
LMNB1P20700 AC000041.1-201ENST00000439655 175 ntBASIC7.69□□□□□ -1.18
LMNB1P20700 AL512605.1-202ENST00000441919 381 ntBASIC7.69□□□□□ -1.18
LMNB1P20700 AL359955.2-201ENST00000445380 353 ntBASIC7.69□□□□□ -1.18
LMNB1P20700 AL627224.1-201ENST00000448334 444 ntBASIC7.69□□□□□ -1.18
LMNB1P20700 BUD31P2-201ENST00000449374 300 ntBASIC7.69□□□□□ -1.18
LMNB1P20700 AC008280.2-201ENST00000455473 307 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms