Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC135983.3-201ENST00000528049 1226 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 AL356057.1-201ENST00000533798 831 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 GCSHP4-201ENST00000538792 439 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 RPL3P13-201ENST00000550415 216 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.69□□□□□ -1.18
ERCC3P19447 AC044913.1-201ENST00000557200 430 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.69□□□□□ -1.18
ERCC3P19447 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC7.69□□□□□ -1.18
ERCC3P19447 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC7.69□□□□□ -1.18
ERCC3P19447 AC022662.1-201ENST00000580252 331 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 PIGPP4-201ENST00000584447 307 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 AC124856.1-201ENST00000600819 896 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 MRPS35P3-201ENST00000603189 709 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.69□□□□□ -1.18
ERCC3P19447 AL352984.2-201ENST00000611153 546 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 uc_338.31-201ENST00000615595 186 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 AC009318.3-201ENST00000616916 503 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 VN1R7P-201ENST00000619242 903 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 AP003497.2-201ENST00000624220 967 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 AC114546.4-201ENST00000624413 369 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
ERCC3P19447 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.69□□□□□ -1.18
ERCC3P19447 PARP4P1-201ENST00000435945 2337 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
ERCC3P19447 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
ERCC3P19447 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
ERCC3P19447 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
ERCC3P19447 CASC19-206ENST00000641028 1430 ntBASIC7.69□□□□□ -1.18
ERCC3P19447 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.68□□□□□ -1.18
ERCC3P19447 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 AC100871.1-201ENST00000507871 1456 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 CYP2G2P-201ENST00000594920 1485 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 AC138393.1-206ENST00000540997 1886 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.68□□□□□ -1.18
ERCC3P19447 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
ERCC3P19447 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.68□□□□□ -1.18
ERCC3P19447 AL121950.1-201ENST00000624993 2077 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.68□□□□□ -1.18
ERCC3P19447 RN7SKP237-201ENST00000364663 301 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 MIR320B1-201ENST00000390209 79 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
ERCC3P19447 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 ERHP2-201ENST00000402323 299 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 AC092745.2-202ENST00000411880 369 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 RAP1BP1-201ENST00000412709 553 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC7.68□□□□□ -1.18
ERCC3P19447 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC7.68□□□□□ -1.18
ERCC3P19447 TRGV6-201ENST00000417928 299 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 PTP4A1P5-201ENST00000420305 455 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC7.68□□□□□ -1.18
ERCC3P19447 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.68□□□□□ -1.18
ERCC3P19447 AC079807.1-201ENST00000429993 481 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 CDY14P-201ENST00000431260 1014 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.68□□□□□ -1.18
ERCC3P19447 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.68□□□□□ -1.18
ERCC3P19447 CDY12P-201ENST00000440679 1015 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 RPS10P18-201ENST00000442662 495 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 POU5F1P5-201ENST00000445059 658 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 CDY13P-201ENST00000445813 1015 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.68□□□□□ -1.18
ERCC3P19447 AL020997.1-201ENST00000446554 349 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 MYO5BP2-201ENST00000449815 1277 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 CDY23P-201ENST00000451661 1014 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 AC110749.1-201ENST00000462007 357 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 RPL35AP19-201ENST00000469425 329 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 RN7SL362P-201ENST00000494228 267 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.68□□□□□ -1.18
ERCC3P19447 MRPS33P3-201ENST00000513456 322 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 NDUFB4P12-201ENST00000513465 390 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 OR5H7P-201ENST00000514084 930 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 TMEM97P2-201ENST00000517841 403 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
ERCC3P19447 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.68□□□□□ -1.18
ERCC3P19447 AADACP1-206ENST00000561502 1193 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 DYNLL1P1-201ENST00000595442 269 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC7.68□□□□□ -1.18
ERCC3P19447 AC015726.1-201ENST00000602353 681 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 AL158042.1-201ENST00000605338 460 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 AP000238.1-201ENST00000608759 426 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 AC105227.2-201ENST00000615075 605 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
ERCC3P19447 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 DDX18P5-201ENST00000534547 1306 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms