Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATF1P18846 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
ATF1P18846 AC097063.1-201ENST00000426714 1797 ntBASIC4.8□□□□□ -1.64
ATF1P18846 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.8□□□□□ -1.64
ATF1P18846 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.8□□□□□ -1.64
ATF1P18846 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.8□□□□□ -1.64
ATF1P18846 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
ATF1P18846 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.79□□□□□ -1.64
ATF1P18846 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ATF1P18846 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
ATF1P18846 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ATF1P18846 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 RPL21P67-201ENST00000402896 478 ntBASIC4.79□□□□□ -1.64
ATF1P18846 AC211486.3-201ENST00000412694 621 ntBASIC4.79□□□□□ -1.64
ATF1P18846 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.79□□□□□ -1.64
ATF1P18846 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.79□□□□□ -1.64
ATF1P18846 HMGB3P24-201ENST00000433260 622 ntBASIC4.79□□□□□ -1.64
ATF1P18846 AC068491.1-201ENST00000449539 1241 ntBASIC4.79□□□□□ -1.64
ATF1P18846 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.79□□□□□ -1.64
ATF1P18846 ACA64.1-201ENST00000459171 127 ntBASIC4.79□□□□□ -1.64
ATF1P18846 RN7SL72P-201ENST00000460697 269 ntBASIC4.79□□□□□ -1.64
ATF1P18846 AP000797.2-201ENST00000475768 606 ntBASIC4.79□□□□□ -1.64
ATF1P18846 RPS3AP15-201ENST00000483874 781 ntBASIC4.79□□□□□ -1.64
ATF1P18846 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.79□□□□□ -1.64
ATF1P18846 AC025458.1-201ENST00000506046 166 ntBASIC4.79□□□□□ -1.64
ATF1P18846 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC4.79□□□□□ -1.64
ATF1P18846 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.79□□□□□ -1.64
ATF1P18846 SCARNA20.4-201ENST00000516969 131 ntBASIC4.79□□□□□ -1.64
ATF1P18846 RN7SKP183-201ENST00000517169 324 ntBASIC4.79□□□□□ -1.64
ATF1P18846 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.79□□□□□ -1.64
ATF1P18846 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
ATF1P18846 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.79□□□□□ -1.64
ATF1P18846 AL365181.4-201ENST00000609800 547 ntBASIC4.79□□□□□ -1.64
ATF1P18846 AL591926.1-201ENST00000620542 217 ntBASIC4.79□□□□□ -1.64
ATF1P18846 AC129778.1-202ENST00000623812 261 ntBASIC4.79□□□□□ -1.64
ATF1P18846 AL591379.1-207ENST00000635982 261 ntBASIC4.79□□□□□ -1.64
ATF1P18846 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.79□□□□□ -1.64
ATF1P18846 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
ATF1P18846 AC132825.8-201ENST00000640783 297 ntBASIC4.79□□□□□ -1.64
ATF1P18846 OR8G3P-202ENST00000641572 1255 ntBASIC4.79□□□□□ -1.64
ATF1P18846 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
ATF1P18846 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ATF1P18846 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ATF1P18846 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ATF1P18846 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ATF1P18846 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ATF1P18846 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.79□□□□□ -1.64
ATF1P18846 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATF1P18846 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.78□□□□□ -1.64
ATF1P18846 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ATF1P18846 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATF1P18846 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.78□□□□□ -1.64
ATF1P18846 AC114947.2-201ENST00000565748 2125 ntBASIC4.78□□□□□ -1.64
ATF1P18846 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.78□□□□□ -1.64
ATF1P18846 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATF1P18846 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATF1P18846 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATF1P18846 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATF1P18846 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.78□□□□□ -1.64
ATF1P18846 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATF1P18846 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATF1P18846 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ATF1P18846 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATF1P18846 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ATF1P18846 RNU1-65P-201ENST00000363919 148 ntBASIC4.78□□□□□ -1.64
ATF1P18846 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATF1P18846 SUGT1P2-201ENST00000379452 992 ntBASIC4.78□□□□□ -1.64
ATF1P18846 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ATF1P18846 AC004386.1-201ENST00000393214 761 ntBASIC4.78□□□□□ -1.64
ATF1P18846 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.78□□□□□ -1.64
ATF1P18846 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATF1P18846 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATF1P18846 AC017019.1-201ENST00000426129 261 ntBASIC4.78□□□□□ -1.64
ATF1P18846 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.78□□□□□ -1.64
ATF1P18846 AC069154.1-201ENST00000432914 542 ntBASIC4.78□□□□□ -1.64
ATF1P18846 AL136455.1-201ENST00000441083 1240 ntBASIC4.78□□□□□ -1.64
ATF1P18846 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
ATF1P18846 AL358876.1-201ENST00000453364 1075 ntBASIC4.78□□□□□ -1.64
ATF1P18846 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ATF1P18846 AC087672.1-201ENST00000479876 766 ntBASIC4.78□□□□□ -1.64
ATF1P18846 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.78□□□□□ -1.64
ATF1P18846 AC092349.1-201ENST00000504903 310 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms