Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC090607.5-201ENST00000615692 224 ntBASIC6.12□□□□□ -1.43
RB1P06400 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.12□□□□□ -1.43
RB1P06400 AC092724.1-201ENST00000624623 3397 ntBASIC6.12□□□□□ -1.43
RB1P06400 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.12□□□□□ -1.43
RB1P06400 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.12□□□□□ -1.43
RB1P06400 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RB1P06400 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.11□□□□□ -1.43
RB1P06400 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
RB1P06400 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
RB1P06400 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RB1P06400 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.11□□□□□ -1.43
RB1P06400 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RB1P06400 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RB1P06400 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RB1P06400 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RB1P06400 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RB1P06400 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RB1P06400 AC005261.6-201ENST00000623072 1387 ntBASIC6.11□□□□□ -1.43
RB1P06400 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RB1P06400 AC103591.2-201ENST00000265259 766 ntBASIC6.11□□□□□ -1.43
RB1P06400 RNU6-386P-201ENST00000362650 107 ntBASIC6.11□□□□□ -1.43
RB1P06400 RNU6-819P-201ENST00000364116 107 ntBASIC6.11□□□□□ -1.43
RB1P06400 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RB1P06400 RNA5SP251-201ENST00000410614 137 ntBASIC6.11□□□□□ -1.43
RB1P06400 RPL37P18-201ENST00000411602 243 ntBASIC6.11□□□□□ -1.43
RB1P06400 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.11□□□□□ -1.43
RB1P06400 METTL15P3-201ENST00000415522 1221 ntBASIC6.11□□□□□ -1.43
RB1P06400 RBMY2KP-201ENST00000418221 992 ntBASIC6.11□□□□□ -1.43
RB1P06400 AC007562.1-201ENST00000421819 517 ntBASIC6.11□□□□□ -1.43
RB1P06400 AC005033.1-201ENST00000428904 813 ntBASIC6.11□□□□□ -1.43
RB1P06400 AL392003.1-201ENST00000434394 243 ntBASIC6.11□□□□□ -1.43
RB1P06400 VN1R54P-201ENST00000435210 1049 ntBASIC6.11□□□□□ -1.43
RB1P06400 OR52B5P-201ENST00000435337 951 ntBASIC6.11□□□□□ -1.43
RB1P06400 AL772161.1-201ENST00000439130 476 ntBASIC6.11□□□□□ -1.43
RB1P06400 AC019185.1-201ENST00000442718 389 ntBASIC6.11□□□□□ -1.43
RB1P06400 AC023274.2-201ENST00000445264 521 ntBASIC6.11□□□□□ -1.43
RB1P06400 AL161722.1-201ENST00000446972 1032 ntBASIC6.11□□□□□ -1.43
RB1P06400 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.11□□□□□ -1.43
RB1P06400 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.11□□□□□ -1.43
RB1P06400 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.11□□□□□ -1.43
RB1P06400 C1DP3-201ENST00000455013 423 ntBASIC6.11□□□□□ -1.43
RB1P06400 RNU1-88P-201ENST00000459274 128 ntBASIC6.11□□□□□ -1.43
RB1P06400 AL603882.1-201ENST00000463059 681 ntBASIC6.11□□□□□ -1.43
RB1P06400 RPL7AP6-201ENST00000477943 801 ntBASIC6.11□□□□□ -1.43
RB1P06400 RPSAP50-201ENST00000481955 852 ntBASIC6.11□□□□□ -1.43
RB1P06400 RN7SL97P-201ENST00000486780 299 ntBASIC6.11□□□□□ -1.43
RB1P06400 AC073610.1-201ENST00000489971 396 ntBASIC6.11□□□□□ -1.43
RB1P06400 SNORA70.17-201ENST00000516449 133 ntBASIC6.11□□□□□ -1.43
RB1P06400 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.11□□□□□ -1.43
RB1P06400 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.11□□□□□ -1.43
RB1P06400 FAM60CP-201ENST00000591086 664 ntBASIC6.11□□□□□ -1.43
RB1P06400 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.11□□□□□ -1.43
RB1P06400 AC022387.2-201ENST00000604050 448 ntBASIC6.11□□□□□ -1.43
RB1P06400 AL445222.1-201ENST00000607259 628 ntBASIC6.11□□□□□ -1.43
RB1P06400 OR52B5P-202ENST00000641118 1110 ntBASIC6.11□□□□□ -1.43
RB1P06400 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RB1P06400 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.11□□□□□ -1.43
RB1P06400 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.11□□□□□ -1.43
RB1P06400 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.11□□□□□ -1.43
RB1P06400 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RB1P06400 ZNF733P-202ENST00000444809 1573 ntBASIC6.1□□□□□ -1.43
RB1P06400 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RB1P06400 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.1□□□□□ -1.43
RB1P06400 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RB1P06400 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RB1P06400 AC011504.1-201ENST00000623331 4103 ntBASIC6.1□□□□□ -1.43
RB1P06400 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.1□□□□□ -1.43
RB1P06400 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RB1P06400 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RB1P06400 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
RB1P06400 NIFKP3-201ENST00000417799 865 ntBASIC6.1□□□□□ -1.43
RB1P06400 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.1□□□□□ -1.43
RB1P06400 NENFP1-201ENST00000419476 466 ntBASIC6.1□□□□□ -1.43
RB1P06400 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.1□□□□□ -1.43
RB1P06400 RCC2P2-201ENST00000422174 918 ntBASIC6.1□□□□□ -1.43
RB1P06400 MAPRE1P3-201ENST00000435438 796 ntBASIC6.1□□□□□ -1.43
RB1P06400 H2AFZP6-201ENST00000444403 394 ntBASIC6.1□□□□□ -1.43
RB1P06400 AL162739.1-201ENST00000450606 307 ntBASIC6.1□□□□□ -1.43
RB1P06400 AP000547.1-201ENST00000454360 617 ntBASIC6.1□□□□□ -1.43
RB1P06400 AL022319.1-201ENST00000458183 1167 ntBASIC6.1□□□□□ -1.43
RB1P06400 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.1□□□□□ -1.43
RB1P06400 ATG10-AS1-201ENST00000504846 648 ntBASIC6.1□□□□□ -1.43
RB1P06400 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.1□□□□□ -1.43
RB1P06400 OR5D15P-201ENST00000531671 942 ntBASIC6.1□□□□□ -1.43
RB1P06400 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.1□□□□□ -1.43
RB1P06400 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.1□□□□□ -1.43
RB1P06400 AC027334.1-201ENST00000603257 310 ntBASIC6.1□□□□□ -1.43
RB1P06400 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.1□□□□□ -1.43
RB1P06400 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
RB1P06400 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RB1P06400 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RB1P06400 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RB1P06400 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RB1P06400 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RB1P06400 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RB1P06400 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RB1P06400 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RB1P06400 AC083837.1-201ENST00000565297 2994 ntBASIC6.09□□□□□ -1.43
RB1P06400 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
RB1P06400 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms