Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC015819.1-201ENST00000613588 663 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AC022106.2-201ENST00000620114 757 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 MIR6823-201ENST00000622118 61 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AP000648.2-201ENST00000624182 404 ntBASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.16□□□□□ -1.74
HLA-DQA1P01909 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
HLA-DQA1P01909 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DQA1P01909 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DQA1P01909 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DQA1P01909 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.15□□□□□ -1.74
HLA-DQA1P01909 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.15□□□□□ -1.74
HLA-DQA1P01909 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
HLA-DQA1P01909 AC019072.1-201ENST00000604535 1551 ntBASIC4.15□□□□□ -1.74
HLA-DQA1P01909 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
HLA-DQA1P01909 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DQA1P01909 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.15□□□□□ -1.74
HLA-DQA1P01909 MAPK10-286ENST00000641208 8747 ntBASIC4.15□□□□□ -1.74
HLA-DQA1P01909 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HLA-DQA1P01909 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
HLA-DQA1P01909 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.15□□□□□ -1.74
HLA-DQA1P01909 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 OR2AH1P-201ENST00000425717 928 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 TRIM60P16-201ENST00000444048 694 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 RPL34P33-201ENST00000486062 334 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AC074255.1-201ENST00000511259 501 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AC108103.1-201ENST00000511286 446 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 HMGN1P9-201ENST00000515212 298 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 RN7SKP253-201ENST00000516424 309 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 KCTD9P6-201ENST00000522306 950 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AC130364.2-201ENST00000528639 604 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AGGF1P7-201ENST00000562369 913 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AC115989.2-201ENST00000578640 563 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AL139407.1-201ENST00000613826 1175 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 RFPL4AP6-201ENST00000616792 846 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AC048341.3-201ENST00000619323 491 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AC015871.5-202ENST00000623252 701 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AC010325.3-201ENST00000641084 394 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AC073869.10-201ENST00000642016 354 ntBASIC4.15□□□□□ -1.75
HLA-DQA1P01909 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DQA1P01909 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 RNA5SP232-201ENST00000364144 119 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AL133260.1-201ENST00000405720 405 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 RN7SKP125-201ENST00000410481 302 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 RPL7AP51-201ENST00000422016 760 ntBASIC4.14□□□□□ -1.75
HLA-DQA1P01909 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.14□□□□□ -1.75
HLA-DQA1P01909 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms