Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC009779.8-201ENST00000641684 4384 ntBASIC5.76□□□□□ -1.49
PDGFBP01127 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
PDGFBP01127 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFBP01127 THAP12P8-201ENST00000447914 2115 ntBASIC5.75□□□□□ -1.49
PDGFBP01127 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.75□□□□□ -1.49
PDGFBP01127 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFBP01127 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFBP01127 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PDGFBP01127 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFBP01127 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFBP01127 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFBP01127 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFBP01127 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PDGFBP01127 AC010132.2-201ENST00000295493 1043 ntBASIC5.75□□□□□ -1.49
PDGFBP01127 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFBP01127 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFBP01127 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFBP01127 RNA5SP30-201ENST00000365552 115 ntBASIC5.75□□□□□ -1.49
PDGFBP01127 SNORA51.8-201ENST00000384234 132 ntBASIC5.75□□□□□ -1.49
PDGFBP01127 RNA5SP339-201ENST00000390987 122 ntBASIC5.75□□□□□ -1.49
PDGFBP01127 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PDGFBP01127 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFBP01127 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.75□□□□□ -1.49
PDGFBP01127 C4BPAP2-201ENST00000428434 478 ntBASIC5.75□□□□□ -1.49
PDGFBP01127 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFBP01127 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.75□□□□□ -1.49
PDGFBP01127 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFBP01127 BZW1P1-201ENST00000454901 1240 ntBASIC5.75□□□□□ -1.49
PDGFBP01127 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFBP01127 RN7SL570P-201ENST00000484405 292 ntBASIC5.75□□□□□ -1.49
PDGFBP01127 RPL23AP40-201ENST00000487630 390 ntBASIC5.75□□□□□ -1.49
PDGFBP01127 AC008897.1-201ENST00000494006 347 ntBASIC5.75□□□□□ -1.49
PDGFBP01127 RAB9BP1-201ENST00000519581 626 ntBASIC5.75□□□□□ -1.49
PDGFBP01127 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFBP01127 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.75□□□□□ -1.49
PDGFBP01127 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFBP01127 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.75□□□□□ -1.49
PDGFBP01127 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.75□□□□□ -1.49
PDGFBP01127 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFBP01127 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.75□□□□□ -1.49
PDGFBP01127 AC087821.1-201ENST00000623639 567 ntBASIC5.75□□□□□ -1.49
PDGFBP01127 AL353662.3-201ENST00000625131 237 ntBASIC5.75□□□□□ -1.49
PDGFBP01127 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
PDGFBP01127 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PDGFBP01127 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PDGFBP01127 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
PDGFBP01127 MSL3P1-202ENST00000440028 1468 ntBASIC5.75□□□□□ -1.49
PDGFBP01127 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.75□□□□□ -1.49
PDGFBP01127 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFBP01127 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFBP01127 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PDGFBP01127 AC245100.2-201ENST00000454544 1679 ntBASIC5.75□□□□□ -1.49
PDGFBP01127 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PDGFBP01127 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.75□□□□□ -1.49
PDGFBP01127 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.74□□□□□ -1.49
PDGFBP01127 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.74□□□□□ -1.49
PDGFBP01127 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PDGFBP01127 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFBP01127 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 U3.36-201ENST00000408418 213 ntBASIC5.74□□□□□ -1.49
PDGFBP01127 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 NIFKP3-201ENST00000417799 865 ntBASIC5.74□□□□□ -1.49
PDGFBP01127 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.74□□□□□ -1.49
PDGFBP01127 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFBP01127 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.74□□□□□ -1.49
PDGFBP01127 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.74□□□□□ -1.49
PDGFBP01127 AC092647.3-201ENST00000443044 633 ntBASIC5.74□□□□□ -1.49
PDGFBP01127 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 AC091153.1-201ENST00000466297 402 ntBASIC5.74□□□□□ -1.49
PDGFBP01127 AC090114.3-201ENST00000479267 829 ntBASIC5.74□□□□□ -1.49
PDGFBP01127 RPL38P3-201ENST00000484463 213 ntBASIC5.74□□□□□ -1.49
PDGFBP01127 AC012123.2-201ENST00000485809 248 ntBASIC5.74□□□□□ -1.49
PDGFBP01127 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
PDGFBP01127 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFBP01127 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFBP01127 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.74□□□□□ -1.49
PDGFBP01127 OR5AZ1P-201ENST00000527448 943 ntBASIC5.74□□□□□ -1.49
PDGFBP01127 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.74□□□□□ -1.49
PDGFBP01127 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
PDGFBP01127 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.74□□□□□ -1.49
PDGFBP01127 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.74□□□□□ -1.49
PDGFBP01127 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.74□□□□□ -1.49
PDGFBP01127 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.74□□□□□ -1.49
PDGFBP01127 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.74□□□□□ -1.49
PDGFBP01127 AC005261.6-201ENST00000623072 1387 ntBASIC5.74□□□□□ -1.49
PDGFBP01127 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.74□□□□□ -1.49
PDGFBP01127 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFBP01127 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.74□□□□□ -1.49
PDGFBP01127 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PDGFBP01127 OLMALINC-203ENST00000641087 3779 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms