Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.38□□□□□ -1.55
NKX2-2O95096 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.38□□□□□ -1.55
NKX2-2O95096 AC093014.1-201ENST00000548926 724 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX2-2O95096 HMGN2P47-201ENST00000559378 272 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 AC106785.3-201ENST00000564064 847 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.38□□□□□ -1.55
NKX2-2O95096 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.38□□□□□ -1.55
NKX2-2O95096 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 AC129778.1-202ENST00000623812 261 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.38□□□□□ -1.55
NKX2-2O95096 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.38□□□□□ -1.55
NKX2-2O95096 AL591379.1-207ENST00000635982 261 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.38□□□□□ -1.55
NKX2-2O95096 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
NKX2-2O95096 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX2-2O95096 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.38□□□□□ -1.55
NKX2-2O95096 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.38□□□□□ -1.55
NKX2-2O95096 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NKX2-2O95096 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NKX2-2O95096 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.37□□□□□ -1.55
NKX2-2O95096 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NKX2-2O95096 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX2-2O95096 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
NKX2-2O95096 AL137141.1-201ENST00000624622 4836 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NKX2-2O95096 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.37□□□□□ -1.55
NKX2-2O95096 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
NKX2-2O95096 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX2-2O95096 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX2-2O95096 SUGT1P2-201ENST00000379452 992 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
NKX2-2O95096 RNA5SP91-201ENST00000390902 119 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 NPM1P37-201ENST00000403105 874 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 MIR1203-201ENST00000408812 85 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
NKX2-2O95096 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX2-2O95096 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX2-2O95096 METTL15P3-201ENST00000415522 1221 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 RPA2P2-201ENST00000419698 796 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX2-2O95096 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.37□□□□□ -1.55
NKX2-2O95096 AC006065.1-201ENST00000422539 802 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.37□□□□□ -1.55
NKX2-2O95096 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX2-2O95096 OR7E116P-201ENST00000448529 957 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 AC069277.2-201ENST00000454211 432 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 NPM1P17-201ENST00000479221 602 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 RN7SL741P-201ENST00000482473 289 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 AC091544.1-201ENST00000484702 348 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX2-2O95096 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX2-2O95096 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX2-2O95096 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX2-2O95096 HMGN2P36-201ENST00000529541 409 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX2-2O95096 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX2-2O95096 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX2-2O95096 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.37□□□□□ -1.55
NKX2-2O95096 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.37□□□□□ -1.55
NKX2-2O95096 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NKX2-2O95096 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
NKX2-2O95096 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.37□□□□□ -1.55
NKX2-2O95096 AC068020.1-201ENST00000594215 661 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.37□□□□□ -1.55
NKX2-2O95096 AC130352.1-201ENST00000602979 661 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 AC120053.1-201ENST00000607706 736 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 AC093388.1-201ENST00000609166 430 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 AL138960.1-201ENST00000613838 513 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 MIR1264-201ENST00000616374 69 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NKX2-2O95096 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NKX2-2O95096 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.37□□□□□ -1.55
NKX2-2O95096 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.37□□□□□ -1.55
NKX2-2O95096 AL359955.1-201ENST00000455242 3275 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
NKX2-2O95096 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.37□□□□□ -1.55
NKX2-2O95096 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
NKX2-2O95096 Z95114.1-201ENST00000624264 14574 ntBASIC5.37□□□□□ -1.55
NKX2-2O95096 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
NKX2-2O95096 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
NKX2-2O95096 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NKX2-2O95096 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.36□□□□□ -1.55
NKX2-2O95096 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NKX2-2O95096 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.36□□□□□ -1.55
NKX2-2O95096 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NKX2-2O95096 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NKX2-2O95096 RAD1P1-201ENST00000231383 813 ntBASIC5.36□□□□□ -1.55
NKX2-2O95096 TMSB4XP2-201ENST00000335179 210 ntBASIC5.36□□□□□ -1.55
NKX2-2O95096 RNU6-792P-201ENST00000363490 107 ntBASIC5.36□□□□□ -1.55
NKX2-2O95096 RNU6-650P-201ENST00000365658 111 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms