Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MIR135B-201ENST00000362189 97 ntBASIC8.4□□□□□ -1.06
RNF40O75150 Y_RNA.157-201ENST00000363638 102 ntBASIC8.4□□□□□ -1.06
RNF40O75150 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RNF40O75150 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RNF40O75150 Y_RNA.452-201ENST00000384202 108 ntBASIC8.4□□□□□ -1.06
RNF40O75150 RNU4-70P-201ENST00000384579 139 ntBASIC8.4□□□□□ -1.06
RNF40O75150 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
RNF40O75150 MIR301B-201ENST00000390813 78 ntBASIC8.4□□□□□ -1.06
RNF40O75150 RPL10P10-201ENST00000403509 664 ntBASIC8.4□□□□□ -1.06
RNF40O75150 Y_RNA.605-201ENST00000410577 105 ntBASIC8.4□□□□□ -1.06
RNF40O75150 RN7SKP240-201ENST00000410583 375 ntBASIC8.4□□□□□ -1.06
RNF40O75150 RN7SKP89-201ENST00000410774 242 ntBASIC8.4□□□□□ -1.06
RNF40O75150 RN7SKP140-201ENST00000411196 284 ntBASIC8.4□□□□□ -1.06
RNF40O75150 EIF1P3-201ENST00000423841 334 ntBASIC8.4□□□□□ -1.06
RNF40O75150 MTCO3P46-201ENST00000425787 232 ntBASIC8.4□□□□□ -1.06
RNF40O75150 PYHIN5P-201ENST00000431627 723 ntBASIC8.4□□□□□ -1.06
RNF40O75150 GTF2IP20-201ENST00000431663 360 ntBASIC8.4□□□□□ -1.06
RNF40O75150 PSMD10P2-201ENST00000432890 672 ntBASIC8.4□□□□□ -1.06
RNF40O75150 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC8.4□□□□□ -1.06
RNF40O75150 AC236972.2-201ENST00000434979 310 ntBASIC8.4□□□□□ -1.06
RNF40O75150 ARL2BPP10-201ENST00000446487 531 ntBASIC8.4□□□□□ -1.06
RNF40O75150 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC8.4□□□□□ -1.06
RNF40O75150 Y_RNA.631-201ENST00000459607 101 ntBASIC8.4□□□□□ -1.06
RNF40O75150 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RNF40O75150 RN7SL201P-201ENST00000482306 296 ntBASIC8.4□□□□□ -1.06
RNF40O75150 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RNF40O75150 AC098799.3-201ENST00000506095 438 ntBASIC8.4□□□□□ -1.06
RNF40O75150 AC103851.1-201ENST00000506833 274 ntBASIC8.4□□□□□ -1.06
RNF40O75150 HSPE1P10-201ENST00000508631 558 ntBASIC8.4□□□□□ -1.06
RNF40O75150 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC8.4□□□□□ -1.06
RNF40O75150 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RNF40O75150 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.4□□□□□ -1.06
RNF40O75150 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC8.4□□□□□ -1.06
RNF40O75150 AC022878.1-201ENST00000530684 149 ntBASIC8.4□□□□□ -1.06
RNF40O75150 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC8.4□□□□□ -1.06
RNF40O75150 AC018630.1-201ENST00000541376 925 ntBASIC8.4□□□□□ -1.06
RNF40O75150 CHCHD3P2-201ENST00000550751 639 ntBASIC8.4□□□□□ -1.06
RNF40O75150 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC8.4□□□□□ -1.06
RNF40O75150 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC8.4□□□□□ -1.06
RNF40O75150 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC8.4□□□□□ -1.06
RNF40O75150 AC010653.1-201ENST00000571108 881 ntBASIC8.4□□□□□ -1.06
RNF40O75150 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC8.4□□□□□ -1.06
RNF40O75150 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC8.4□□□□□ -1.06
RNF40O75150 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC8.4□□□□□ -1.06
RNF40O75150 MTCO2P22-201ENST00000603246 681 ntBASIC8.4□□□□□ -1.06
RNF40O75150 uc_338.5-201ENST00000611839 155 ntBASIC8.4□□□□□ -1.06
RNF40O75150 RN7SL301P-202ENST00000618767 298 ntBASIC8.4□□□□□ -1.06
RNF40O75150 RMST-210ENST00000640149 2844 ntTSL 5 BASIC8.4□□□□□ -1.06
RNF40O75150 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RNF40O75150 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RNF40O75150 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.4□□□□□ -1.07
RNF40O75150 XRCC6P2-201ENST00000457831 1822 ntBASIC8.4□□□□□ -1.07
RNF40O75150 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
RNF40O75150 AC009135.2-201ENST00000624136 1768 ntBASIC8.4□□□□□ -1.07
RNF40O75150 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
RNF40O75150 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
RNF40O75150 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RNF40O75150 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.39□□□□□ -1.07
RNF40O75150 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.39□□□□□ -1.07
RNF40O75150 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC8.39□□□□□ -1.07
RNF40O75150 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RNF40O75150 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RNF40O75150 USP48-203ENST00000374732 3037 ntTSL 2 BASIC8.39□□□□□ -1.07
RNF40O75150 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
RNF40O75150 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
RNF40O75150 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC8.39□□□□□ -1.07
RNF40O75150 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
RNF40O75150 MIR568-201ENST00000385036 95 ntBASIC8.39□□□□□ -1.07
RNF40O75150 MT-TG-201ENST00000387429 68 ntBASIC8.39□□□□□ -1.07
RNF40O75150 MIR1284-201ENST00000408337 120 ntBASIC8.39□□□□□ -1.07
RNF40O75150 RN7SKP119-201ENST00000410753 273 ntBASIC8.39□□□□□ -1.07
RNF40O75150 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC8.39□□□□□ -1.07
RNF40O75150 AL353678.1-201ENST00000422735 741 ntBASIC8.39□□□□□ -1.07
RNF40O75150 AL049758.1-201ENST00000423154 397 ntBASIC8.39□□□□□ -1.07
RNF40O75150 SETP9-201ENST00000423837 832 ntBASIC8.39□□□□□ -1.07
RNF40O75150 RPL7P56-201ENST00000429441 717 ntBASIC8.39□□□□□ -1.07
RNF40O75150 GAPDHP19-201ENST00000431768 1005 ntBASIC8.39□□□□□ -1.07
RNF40O75150 AC023274.2-201ENST00000445264 521 ntBASIC8.39□□□□□ -1.07
RNF40O75150 MTCO3P20-201ENST00000454926 688 ntBASIC8.39□□□□□ -1.07
RNF40O75150 SNORD19B-201ENST00000459623 84 ntBASIC8.39□□□□□ -1.07
RNF40O75150 AF213884.1-201ENST00000488102 463 ntBASIC8.39□□□□□ -1.07
RNF40O75150 AC090096.1-201ENST00000489168 390 ntBASIC8.39□□□□□ -1.07
RNF40O75150 AC114981.1-201ENST00000503897 678 ntBASIC8.39□□□□□ -1.07
RNF40O75150 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC8.39□□□□□ -1.07
RNF40O75150 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC8.39□□□□□ -1.07
RNF40O75150 AF131216.2-201ENST00000512316 564 ntBASIC8.39□□□□□ -1.07
RNF40O75150 AC104136.1-201ENST00000512969 394 ntBASIC8.39□□□□□ -1.07
RNF40O75150 NPM1P21-201ENST00000513394 762 ntBASIC8.39□□□□□ -1.07
RNF40O75150 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC8.39□□□□□ -1.07
RNF40O75150 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC8.39□□□□□ -1.07
RNF40O75150 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC8.39□□□□□ -1.07
RNF40O75150 OR5BN1P-201ENST00000532955 829 ntBASIC8.39□□□□□ -1.07
RNF40O75150 DERA-209ENST00000532964 854 ntTSL 5 BASIC8.39□□□□□ -1.07
RNF40O75150 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC8.39□□□□□ -1.07
RNF40O75150 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC8.39□□□□□ -1.07
RNF40O75150 HIGD1AP9-201ENST00000550710 279 ntBASIC8.39□□□□□ -1.07
RNF40O75150 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC8.39□□□□□ -1.07
RNF40O75150 AL390334.1-201ENST00000556395 450 ntBASIC8.39□□□□□ -1.07
RNF40O75150 UBE2CP1-201ENST00000557130 554 ntBASIC8.39□□□□□ -1.07
RNF40O75150 DNM1P34-202ENST00000567850 315 ntBASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms