Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
CUX2O14529 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC9.4□□□□□ -0.9
CUX2O14529 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CUX2O14529 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CUX2O14529 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
CUX2O14529 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CUX2O14529 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
CUX2O14529 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
CUX2O14529 RNA5SP171-201ENST00000391071 115 ntBASIC9.4□□□□□ -0.91
CUX2O14529 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC9.4□□□□□ -0.91
CUX2O14529 EIF2S2P2-201ENST00000447161 982 ntBASIC9.4□□□□□ -0.91
CUX2O14529 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC9.4□□□□□ -0.91
CUX2O14529 BTF3P13-201ENST00000513224 490 ntBASIC9.4□□□□□ -0.91
CUX2O14529 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC9.4□□□□□ -0.91
CUX2O14529 MIR4311-201ENST00000580794 100 ntBASIC9.4□□□□□ -0.91
CUX2O14529 MIR4691-201ENST00000583764 85 ntBASIC9.4□□□□□ -0.91
CUX2O14529 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC9.4□□□□□ -0.91
CUX2O14529 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC9.4□□□□□ -0.91
CUX2O14529 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC9.4□□□□□ -0.91
CUX2O14529 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC9.39□□□□□ -0.91
CUX2O14529 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC9.39□□□□□ -0.91
CUX2O14529 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC9.39□□□□□ -0.91
CUX2O14529 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
CUX2O14529 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CUX2O14529 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
CUX2O14529 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC9.39□□□□□ -0.91
CUX2O14529 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
CUX2O14529 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CUX2O14529 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CUX2O14529 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
CUX2O14529 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CUX2O14529 AL034549.2-201ENST00000618285 3373 ntBASIC9.39□□□□□ -0.91
CUX2O14529 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CUX2O14529 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC9.39□□□□□ -0.91
CUX2O14529 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CUX2O14529 RNA5-8SP7-201ENST00000363443 155 ntBASIC9.39□□□□□ -0.91
CUX2O14529 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
CUX2O14529 AL133388.1-201ENST00000404509 287 ntBASIC9.39□□□□□ -0.91
CUX2O14529 AC016027.5-201ENST00000427227 210 ntBASIC9.39□□□□□ -0.91
CUX2O14529 AK3P5-201ENST00000432033 519 ntBASIC9.39□□□□□ -0.91
CUX2O14529 AC009127.1-201ENST00000467090 155 ntBASIC9.39□□□□□ -0.91
CUX2O14529 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC9.39□□□□□ -0.91
CUX2O14529 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC9.39□□□□□ -0.91
CUX2O14529 SCARNA13-201ENST00000516672 275 ntBASIC9.39□□□□□ -0.91
CUX2O14529 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC9.39□□□□□ -0.91
CUX2O14529 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC9.39□□□□□ -0.91
CUX2O14529 AC245389.1-201ENST00000605141 529 ntBASIC9.39□□□□□ -0.91
CUX2O14529 USP8-204ENST00000425032 3559 ntTSL 2 BASIC9.39□□□□□ -0.91
CUX2O14529 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC9.39□□□□□ -0.91
CUX2O14529 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CUX2O14529 Z98755.1-201ENST00000407015 1384 ntBASIC9.39□□□□□ -0.91
CUX2O14529 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC9.39□□□□□ -0.91
CUX2O14529 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CUX2O14529 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CUX2O14529 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC9.38□□□□□ -0.91
CUX2O14529 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CUX2O14529 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC9.38□□□□□ -0.91
CUX2O14529 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
CUX2O14529 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
CUX2O14529 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CUX2O14529 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CUX2O14529 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CUX2O14529 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC9.38□□□□□ -0.91
CUX2O14529 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC9.38□□□□□ -0.91
CUX2O14529 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC9.38□□□□□ -0.91
CUX2O14529 AC096775.1-201ENST00000437724 448 ntBASIC9.38□□□□□ -0.91
CUX2O14529 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC9.38□□□□□ -0.91
CUX2O14529 AC006967.1-201ENST00000467608 589 ntBASIC9.38□□□□□ -0.91
CUX2O14529 CR383656.1-201ENST00000484916 377 ntBASIC9.38□□□□□ -0.91
CUX2O14529 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC9.38□□□□□ -0.91
CUX2O14529 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC9.38□□□□□ -0.91
CUX2O14529 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
CUX2O14529 AL049779.3-201ENST00000557141 606 ntBASIC9.38□□□□□ -0.91
CUX2O14529 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC9.38□□□□□ -0.91
CUX2O14529 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC9.38□□□□□ -0.91
CUX2O14529 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC9.38□□□□□ -0.91
CUX2O14529 AL627230.1-201ENST00000613077 211 ntBASIC9.38□□□□□ -0.91
CUX2O14529 MLECP1-201ENST00000615893 709 ntBASIC9.38□□□□□ -0.91
CUX2O14529 AL591926.8-201ENST00000616876 211 ntBASIC9.38□□□□□ -0.91
CUX2O14529 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC9.38□□□□□ -0.91
CUX2O14529 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CUX2O14529 AC123769.2-201ENST00000624332 5984 ntBASIC9.38□□□□□ -0.91
CUX2O14529 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CUX2O14529 CPS1-IT1-201ENST00000628368 2306 ntBASIC9.38□□□□□ -0.91
CUX2O14529 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
CUX2O14529 AL122126.1-201ENST00000546905 1318 ntBASIC9.37□□□□□ -0.91
CUX2O14529 AC012213.2-201ENST00000562917 4597 ntBASIC9.37□□□□□ -0.91
CUX2O14529 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC9.37□□□□□ -0.91
CUX2O14529 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
CUX2O14529 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC9.37□□□□□ -0.91
CUX2O14529 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CUX2O14529 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC9.37□□□□□ -0.91
CUX2O14529 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC9.37□□□□□ -0.91
CUX2O14529 AC007568.1-201ENST00000422912 471 ntBASIC9.37□□□□□ -0.91
CUX2O14529 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CUX2O14529 RHOT1P3-201ENST00000436571 331 ntBASIC9.37□□□□□ -0.91
CUX2O14529 Z92846.1-201ENST00000456203 268 ntBASIC9.37□□□□□ -0.91
CUX2O14529 OR4A2P-201ENST00000527276 913 ntBASIC9.37□□□□□ -0.91
CUX2O14529 DPPA3P2-202ENST00000557188 1219 ntBASIC9.37□□□□□ -0.91
CUX2O14529 MIR4277-201ENST00000578298 84 ntBASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms