Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
UPK1AO00322 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UPK1AO00322 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.18□□□□□ -1.58
UPK1AO00322 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.18□□□□□ -1.58
UPK1AO00322 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.17□□□□□ -1.58
UPK1AO00322 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
UPK1AO00322 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1AO00322 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1AO00322 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1AO00322 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1AO00322 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.17□□□□□ -1.58
UPK1AO00322 RNA5SP46-201ENST00000362370 120 ntBASIC5.17□□□□□ -1.58
UPK1AO00322 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1AO00322 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.17□□□□□ -1.58
UPK1AO00322 RNA5SP284-201ENST00000384547 118 ntBASIC5.17□□□□□ -1.58
UPK1AO00322 RAB5CP1-201ENST00000395972 580 ntBASIC5.17□□□□□ -1.58
UPK1AO00322 GAPDHP42-201ENST00000406848 981 ntBASIC5.17□□□□□ -1.58
UPK1AO00322 AL133173.1-201ENST00000423458 397 ntBASIC5.17□□□□□ -1.58
UPK1AO00322 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1AO00322 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.17□□□□□ -1.58
UPK1AO00322 RPL23AP19-201ENST00000436229 369 ntBASIC5.17□□□□□ -1.58
UPK1AO00322 EEF1B2P6-201ENST00000445713 673 ntBASIC5.17□□□□□ -1.58
UPK1AO00322 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.17□□□□□ -1.58
UPK1AO00322 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.17□□□□□ -1.58
UPK1AO00322 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.17□□□□□ -1.58
UPK1AO00322 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1AO00322 IGBP1P4-201ENST00000503202 879 ntBASIC5.17□□□□□ -1.58
UPK1AO00322 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.17□□□□□ -1.58
UPK1AO00322 AC109481.1-201ENST00000509173 282 ntBASIC5.17□□□□□ -1.58
UPK1AO00322 IMPA1P1-201ENST00000510718 842 ntBASIC5.17□□□□□ -1.58
UPK1AO00322 NPM1P21-201ENST00000513394 762 ntBASIC5.17□□□□□ -1.58
UPK1AO00322 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1AO00322 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.17□□□□□ -1.58
UPK1AO00322 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.17□□□□□ -1.58
UPK1AO00322 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.17□□□□□ -1.58
UPK1AO00322 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.17□□□□□ -1.58
UPK1AO00322 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.17□□□□□ -1.58
UPK1AO00322 PPATP2-201ENST00000605635 508 ntBASIC5.17□□□□□ -1.58
UPK1AO00322 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.17□□□□□ -1.58
UPK1AO00322 AC091932.2-201ENST00000623014 291 ntBASIC5.17□□□□□ -1.58
UPK1AO00322 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.17□□□□□ -1.58
UPK1AO00322 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1AO00322 LINC01963-201ENST00000562038 3148 ntBASIC5.17□□□□□ -1.58
UPK1AO00322 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
UPK1AO00322 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.17□□□□□ -1.58
UPK1AO00322 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1AO00322 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.17□□□□□ -1.58
UPK1AO00322 AC125336.1-201ENST00000508893 2827 ntBASIC5.17□□□□□ -1.58
UPK1AO00322 AC003973.3-201ENST00000624863 2822 ntBASIC5.17□□□□□ -1.58
UPK1AO00322 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.17□□□□□ -1.58
UPK1AO00322 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.17□□□□□ -1.58
UPK1AO00322 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1AO00322 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1AO00322 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
UPK1AO00322 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1AO00322 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1AO00322 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1AO00322 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1AO00322 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1AO00322 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1AO00322 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
UPK1AO00322 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
UPK1AO00322 THAP12P5-201ENST00000405864 2275 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1AO00322 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1AO00322 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1AO00322 RNA5SP510-201ENST00000364697 99 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 MIR551A-201ENST00000385042 96 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 OR2AT2P-201ENST00000413438 905 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 AL596448.1-201ENST00000415024 392 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.16□□□□□ -1.58
UPK1AO00322 BMS1P17-202ENST00000416720 316 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 MTND6P12-201ENST00000428247 522 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 OR6D1P-201ENST00000436165 939 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.16□□□□□ -1.58
UPK1AO00322 AC016772.1-201ENST00000444170 1261 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 AL358876.1-201ENST00000453364 1075 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1AO00322 LDHBP2-201ENST00000456969 1005 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.16□□□□□ -1.58
UPK1AO00322 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.16□□□□□ -1.58
UPK1AO00322 AC138866.2-201ENST00000508650 584 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 NRBF2P4-201ENST00000520874 850 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.16□□□□□ -1.58
UPK1AO00322 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.16□□□□□ -1.58
UPK1AO00322 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.16□□□□□ -1.58
UPK1AO00322 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.16□□□□□ -1.58
UPK1AO00322 AL049872.1-201ENST00000556323 322 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.16□□□□□ -1.58
UPK1AO00322 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.16□□□□□ -1.58
UPK1AO00322 AC008115.3-201ENST00000614874 549 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
UPK1AO00322 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1AO00322 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
UPK1AO00322 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1AO00322 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.16□□□□□ -1.58
UPK1AO00322 RNF19BPY-201ENST00000458209 1550 ntBASIC5.16□□□□□ -1.58
UPK1AO00322 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
UPK1AO00322 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms