Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RPS3AP15-201ENST00000483874 781 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 RPL32P33-201ENST00000487023 394 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AC073610.1-201ENST00000489971 396 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AC009120.1-201ENST00000493458 473 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AC021678.3-201ENST00000517893 476 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 IGLV3-30-201ENST00000524362 298 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AC005363.1-201ENST00000530779 351 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 NMNAT1P5-201ENST00000559657 841 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AP005262.1-201ENST00000582646 997 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AL353729.2-201ENST00000605859 1249 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 AC083899.1-201ENST00000454465 3819 ntBASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DRB4X5D2U9 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 OR9K1P-201ENST00000326513 941 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AL159987.1-201ENST00000347911 293 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 HYALP1-201ENST00000417674 1279 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 GAPDHP48-201ENST00000436626 961 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 HMGN1P2-201ENST00000445197 310 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AP006222.1-205ENST00000450734 457 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AC094085.1-201ENST00000468914 584 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 ATP5LP5-201ENST00000483050 299 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AC021146.10-201ENST00000515628 706 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AGGF1P7-201ENST00000562369 913 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 RN7SL544P-201ENST00000617232 284 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 RN7SL763P-201ENST00000620922 284 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AC087565.3-203ENST00000641018 837 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 OR8A1-204ENST00000642111 1145 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AC007996.1-201ENST00000620414 2821 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 ICE2P1-201ENST00000512800 1849 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AC104260.2-201ENST00000623551 3497 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AC019072.1-201ENST00000604535 1551 ntBASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DRB4X5D2U9 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HLA-DRB4X5D2U9 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HLA-DRB4X5D2U9 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HLA-DRB4X5D2U9 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.21□□□□□ -1.73
HLA-DRB4X5D2U9 AC063923.1-201ENST00000478982 1619 ntBASIC4.21□□□□□ -1.73
HLA-DRB4X5D2U9 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HLA-DRB4X5D2U9 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DRB4X5D2U9 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DRB4X5D2U9 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DRB4X5D2U9 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
HLA-DRB4X5D2U9 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DRB4X5D2U9 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms