Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.9□□□□□ -1.31
COL4A3BPQ9Y5P4 HSPD1P9-201ENST00000420325 1636 ntBASIC6.9□□□□□ -1.31
COL4A3BPQ9Y5P4 HSPD1P14-201ENST00000432666 1618 ntBASIC6.9□□□□□ -1.31
COL4A3BPQ9Y5P4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
COL4A3BPQ9Y5P4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 COX6B1P3-201ENST00000312310 260 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 MIR122-201ENST00000385044 85 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 MTCO3P4-201ENST00000419236 787 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC115283.1-201ENST00000427353 400 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 ETF1P3-201ENST00000430422 1160 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 FTLP19-201ENST00000433300 394 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 MTCO1P52-201ENST00000433928 531 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC110602.1-201ENST00000437414 318 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC079922.1-201ENST00000443291 359 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 PPIAP7-201ENST00000454070 489 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC018635.1-201ENST00000468292 1030 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AP000620.1-201ENST00000527147 504 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AP002373.2-201ENST00000541631 1060 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC007346.1-201ENST00000569208 867 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 MIR4675-201ENST00000577898 77 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC016839.1-201ENST00000578162 867 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC022106.1-201ENST00000612834 766 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 U1.31-201ENST00000620022 160 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 MTCO1P7-201ENST00000419523 1542 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC020633.1-201ENST00000468439 2247 ntBASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.89□□□□□ -1.31
COL4A3BPQ9Y5P4 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 AC024651.2-201ENST00000562480 2098 ntBASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 AL359091.1-201ENST00000449048 1734 ntBASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 METTL21EP-201ENST00000298105 713 ntBASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 SNORA51.9-201ENST00000384295 124 ntBASIC6.88□□□□□ -1.31
COL4A3BPQ9Y5P4 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms