Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AL161729.3-201ENST00000603533 673 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC002550.2-201ENST00000621246 394 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 ATE1-AS1-202ENST00000636460 506 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AL121936.2-201ENST00000641935 662 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 MAPK10-377ENST00000642006 2752 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 OR5BR1P-201ENST00000524992 1330 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 WASF5P-205ENST00000428639 1455 ntBASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.49□□□□□ -1.21
PCDHB11Q9Y5F2 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 HSPA8P17-201ENST00000427029 1382 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AP000766.1-201ENST00000561746 4140 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 RNU6-1066P-201ENST00000363573 105 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 SNORD15A-201ENST00000384214 148 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 RNU6-332P-201ENST00000391193 108 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 RPS3AP36-201ENST00000398190 775 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 OR2W4P-201ENST00000406496 926 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC009237.9-201ENST00000414800 347 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 ZNF90P2-204ENST00000419323 1075 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC062016.2-201ENST00000420950 676 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 FDPSP1-201ENST00000424976 1071 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 FDPSP6-201ENST00000425091 512 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC005033.1-201ENST00000428904 813 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC009299.1-201ENST00000429684 717 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 FTH1P20-201ENST00000434913 548 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 RN7SL19P-201ENST00000462522 306 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC022730.2-201ENST00000465359 452 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC023598.1-201ENST00000472521 361 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 RPL5P15-201ENST00000475870 897 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC104687.1-201ENST00000485829 412 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 EIF3LP3-201ENST00000495197 822 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC097263.1-201ENST00000496795 606 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC233724.1-201ENST00000503894 233 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC010409.2-201ENST00000505780 478 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AL512310.1-201ENST00000548639 172 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AL132640.2-202ENST00000559732 614 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC025678.1-201ENST00000567861 338 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC040162.2-201ENST00000573092 157 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 MIR3137-201ENST00000577367 75 ntBASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
PCDHB11Q9Y5F2 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms