Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 AC090022.1-201ENST00000546569 311 ntBASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 AGGF1P7-201ENST00000562369 913 ntBASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 AL133481.2-203ENST00000607558 139 ntBASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 BCORP1-203ENST00000513194 5093 ntBASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.63□□□□□ -1.35
CLIP2Q9UDT6 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 CASC19-248ENST00000641674 1356 ntBASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 GAPDHP42-201ENST00000406848 981 ntBASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 MARK2P12-201ENST00000420129 585 ntBASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 AC019185.1-201ENST00000442718 389 ntBASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 RANP1-206ENST00000455094 651 ntBASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 RPS4XP14-201ENST00000493072 781 ntBASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 IGLV3-24-201ENST00000517477 197 ntBASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 AC015720.2-201ENST00000567709 334 ntBASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 AL513327.3-201ENST00000602618 469 ntBASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 PWAR1-201ENST00000624188 2414 ntBASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.62□□□□□ -1.35
CLIP2Q9UDT6 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 UGT2B24P-201ENST00000514441 1597 ntBASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 RNA5SP91-201ENST00000390902 119 ntBASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 GABARAPL3-201ENST00000412799 354 ntBASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 NPM1P4-201ENST00000414095 812 ntBASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 BX510359.3-201ENST00000422168 306 ntBASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 AC006335.2-201ENST00000437993 330 ntBASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 MEMO1P4-201ENST00000453590 386 ntBASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 RN7SL629P-201ENST00000489622 285 ntBASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 AC010245.2-201ENST00000606908 1167 ntBASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 AL035661.1-201ENST00000620459 1144 ntBASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 AC132068.1-201ENST00000623805 459 ntBASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 AC005618.4-201ENST00000625053 554 ntBASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CLIP2Q9UDT6 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms